RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 IGKV2D-30A0A075B6S6 120 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 SPTY2D1-AS1A0A0U1RR47 76 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 A0A1B0GX51 115 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 TMEM218A2RU14 115 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 FOXI3A8MTJ6 420 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 DNASE2O00115 360 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 GABRPO00591 440 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 MRPS12O15235 138 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 BUB3O43684 328 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 FKBP6O75344 327 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 LYPD3O95274 346 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 PFN1P07737 140 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 CT45A6P0DMU7 189 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 CT45A5P0DMU8 189 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 CT45A7P0DMV0 189 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 FOLR2P14207 255 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 ZNF250P15622 560 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RAB5AP20339 215 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 LMO2P25791 158 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 IL12AP29459 219 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 CASP1P29466 404 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 CMPK1P30085 196 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 SPRP35270 261 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 OPRL1P41146 370 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 TAF6P49848 677 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 EMP1P54849 157 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RPL26P61254 145 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RPL27P61353 136 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RPS28P62857 69 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RUNX1Q01196 453 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RPL18AQ02543 176 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 EBPQ15125 230 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 TIGITQ495A1 244 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 SCGB2B2Q4G0G5 96 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 CT45A1Q5HYN5 189 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 AVPI1Q5T686 147 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RSBN1Q5VWQ0 802 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 OR4C11Q6IEV9 310 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 ZNF343Q6P1L6 599 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 Q6ZSR6 202 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 OAFQ86UD1 273 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 TMEM219Q86XT9 240 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 SLC22A15Q8IZD6 547 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 COX18Q8N8Q8 333 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 OR10G7Q8NGN6 311 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 CT45A3Q8NHU0 189 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 WFDC5Q8TCV5 224 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 HIST1H2BAQ96A08 127 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 BORCS7Q96B45 105 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 ADGRG7Q96K78 797 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 BMFQ96LC9 184 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RNF157Q96PX1 679 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 TP53RKQ96S44 253 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 FAM173AQ9BQD7 235 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 LRRC61Q9BV99 259 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 SUCNR1Q9BXA5 334 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 LIME1Q9H400 295 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 MEPEQ9NQ76 525 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 LYRM2Q9NU23 88 aaPredicted RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 MRPL16Q9NX20 251 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 PRNDQ9UKY0 176 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 RPL26L1Q9UNX3 145 aaKnown RBP4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 HDGFL3Q9Y3E1 203 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 OR2W1Q9Y3N9 320 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 OR51B2Q9Y5P1 312 aa4.09□□□□□ -1.75
ECHDC1-204ENST00000368292 DOCK7Q96N67 2140 aa4.09□□□□□ -1.76
ECHDC1-204ENST00000368292 IGLV5-37A0A075B6J1 123 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 TRAV36DV7A0A075B6V5 113 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 TRAV30A0A087WSZ9 112 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 A0A0J9YY10 115 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 FAM240AA0A1B0GVK7 77 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 A0A1B0GX78 115 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 KRTAP29-1A8MX34 341 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 SMKR1H3BMG3 65 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 FCN1O00602 326 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 CCL25O15444 150 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 MMP23AO75900 390 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 CDRT1O95170 752 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 PMS2P2O95744 297 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 IL3P08700 152 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 GKN3PP0CG01 181 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 HLA-DOBP13765 273 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 AZU1P20160 251 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 KDELR1P24390 212 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 CDK2P24941 298 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 NPY1RP25929 384 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 TSFMP43897 325 aaKnown RBP4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 SNRPD1P62314 119 aaKnown RBP4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 SLC35A2P78381 396 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 POU3F1Q03052 451 aaPredicted RBP4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 CLINT1Q14677 625 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 SLC10A1Q14973 349 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 RHEBQ15382 184 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 GUCA2BQ16661 112 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 ZFP69Q49AA0 526 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 COL5A1-AS1Q5SY13 56 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 TRNP1Q6NT89 227 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 FBXL22Q6P050 247 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 ARL9Q6T311 187 aa4.08□□□□□ -1.76
ECHDC1-204ENST00000368292 C9orf139Q6ZV77 190 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms