RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 PSG11Q9UQ72 335 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 PRELID3BQ9Y3B1 194 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 TANC2Q9HCD6 1990 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 SPENQ96T58 3664 aaKnown RBP11.66□□□□□ -0.54
USF1-202ENST00000368020 PPT1P50897 306 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 TMEM267Q0VDI3 215 aaPredicted RBP11.66□□□□□ -0.54
USF1-202ENST00000368020 Q3ZCU0 254 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 PINX1Q96BK5 328 aaKnown RBP11.66□□□□□ -0.54
USF1-202ENST00000368020 GCM1Q9NP62 436 aa11.66□□□□□ -0.54
USF1-202ENST00000368020 USF3Q68DE3 2245 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 CHD6Q8TD26 2715 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 TRGV10A0A0A0MS01 117 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 FAM74A7A6NL05 159 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 PPIHO43447 177 aaKnown RBP11.65□□□□□ -0.54
USF1-202ENST00000368020 RAMP3O60896 148 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 C1QL1O75973 258 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 S1PR2O95136 353 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 HPRT1P00492 218 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 KRASP01116 189 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 IGHV1-46P01743 117 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 CD55P08174 381 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 IAPPP10997 89 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 PAX6P26367 422 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 G6PCP35575 357 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 FHITP49789 147 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 RPL30P62888 115 aaKnown RBP11.65□□□□□ -0.54
USF1-202ENST00000368020 TLE1Q04724 770 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 ZNF816Q0VGE8 651 aaPredicted RBP11.65□□□□□ -0.54
USF1-202ENST00000368020 FAM74A3Q4VXF1 159 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 TMEM14EPQ6UXP3 125 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 ZNF525Q8N782 197 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 TPRX1Q8N7U7 411 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 RBKSQ9H477 322 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 ZNF665Q9H7R5 613 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 CALYQ9NYX4 217 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 TIMM9Q9Y5J7 89 aa11.65□□□□□ -0.54
USF1-202ENST00000368020 DSCAML1Q8TD84 2053 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 MARCH11A6NNE9 402 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 C17orf98A8MV24 154 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 H3BP45 60 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 SIGLEC5O15389 551 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 METTL15P1P0C7V9 234 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 CCKARP32238 428 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 DUTP33316 252 aaKnown RBP11.64□□□□□ -0.55
USF1-202ENST00000368020 EDDM3BP56851 147 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 RPP30P78346 268 aaKnown RBP11.64□□□□□ -0.55
USF1-202ENST00000368020 IZUMO4Q1ZYL8 232 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 LRRC75BQ2VPJ9 315 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 SPANXN5Q5MJ07 72 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 STUMQ69YW2 141 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 THNSL2Q86YJ6 484 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 RFESDQ8TAC1 157 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 C5orf30Q96GV9 206 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 SCRT1Q9BWW7 348 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 SH3BGRL2Q9UJC5 107 aa11.64□□□□□ -0.55
USF1-202ENST00000368020 SPTBN1Q01082 2364 aaKnown RBP11.64□□□□□ -0.55
USF1-202ENST00000368020 H7C2Y5 167 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 CCL21O00585 134 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 ST8SIA5O15466 376 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 NUPL2O15504 423 aaKnown RBP11.63□□□□□ -0.55
USF1-202ENST00000368020 LOXL3P58215 753 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 ERVK-16P61578 105 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 SLC38A11Q08AI6 406 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 AARDQ4LEZ3 155 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 TEX36Q5VZQ5 186 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 ADTRPQ96IZ2 230 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 CLCC1Q96S66 551 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 SMCO4Q9NRQ5 59 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 IGHV3OR15-7A0A075B7D8 119 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 IGHV3-43A0A0B4J1X8 118 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 KBTBD11-OT1A0A1B0GTJ5 212 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 RBFOX3A6NFN3 312 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 NKX6-3A6NJ46 265 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 ZNF729A6NN14 1252 aaPredicted RBP11.63□□□□□ -0.55
USF1-202ENST00000368020 SOX15O60248 233 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 IGHV3-43DP0DP04 118 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 NPBWR1P48145 328 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 RHEBQ15382 184 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 BTNL3Q6UXE8 466 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 C1orf87Q8N0U7 546 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 ZNF843Q8N446 348 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 ZNRF1Q8ND25 227 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 DTD1Q8TEA8 209 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 R3HDM4Q96D70 268 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 TMEM147Q9BVK8 224 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 EGLN1Q9GZT9 426 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 LINC00574Q9H8X3 128 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 CLN8Q9UBY8 286 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 ZNF462Q96JM2 2506 aa11.63□□□□□ -0.55
USF1-202ENST00000368020 CADP27708 2225 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 LINC00473A8K010 186 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 RBMXL2O75526 392 aaKnown RBP11.62□□□□□ -0.55
USF1-202ENST00000368020 MBP02144 154 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 TFF1P04155 84 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 HSPB1P04792 205 aaKnown RBP11.62□□□□□ -0.55
USF1-202ENST00000368020 CGB3P0DN86 165 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 CGB7P0DN87 165 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 RUNX1Q01196 453 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 OR2B11Q5JQS5 317 aa11.62□□□□□ -0.55
USF1-202ENST00000368020 OR10P1Q8NGE3 313 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms