RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 HTN1P15515 57 aa12.77□□□□□ -0.36
CHD4-201ENST00000357008 FHL5Q5TD97 284 aa12.77□□□□□ -0.36
CHD4-201ENST00000357008 PSMG3Q9BT73 122 aaPredicted RBP12.77□□□□□ -0.36
CHD4-201ENST00000357008 TMEM250H0YL14 139 aa12.77□□□□□ -0.36
CHD4-201ENST00000357008 HLA-DRB1P01911 266 aa12.77□□□□□ -0.36
CHD4-201ENST00000357008 ARL14EPLP0DKL9 152 aa12.77□□□□□ -0.36
CHD4-201ENST00000357008 FHITP49789 147 aa12.77□□□□□ -0.36
CHD4-201ENST00000357008 HSPE1P61604 102 aaKnown RBP12.77□□□□□ -0.36
CHD4-201ENST00000357008 TMEM78Q5T7P6 136 aa12.77□□□□□ -0.36
CHD4-201ENST00000357008 DIRC2Q96SL1 478 aa12.77□□□□□ -0.36
CHD4-201ENST00000357008 IGKV1D-42A0A075B6H8 117 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 TMEM70Q9BUB7 260 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 ZP1P60852 638 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 ECSCRQ19T08 205 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 C2orf68Q2NKX9 166 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 SNAI3Q3KNW1 292 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 ZNF506Q5JVG8 444 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 TMEM183AQ8IXX5 376 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 OR4A5Q8NH83 315 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 DNAJC4Q9NNZ3 241 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 NUBP1P53384 320 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 MMD2Q8IY49 270 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 CTHRC1Q96CG8 243 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 CCL13Q99616 98 aa12.77□□□□□ -0.37
CHD4-201ENST00000357008 ZNF71Q9NQZ8 489 aaPredicted RBP12.77□□□□□ -0.37
CHD4-201ENST00000357008 SSTR5P35346 364 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 C19orf24Q9BVV8 132 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 MIA3Q5JRA6 1907 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 LOC107984156A0A0G2JMH3 177 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 SMIM10L1P0DMW3 83 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 ARL17AQ8IVW1 177 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 SMIM10Q96HG1 83 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 KCNMB2Q9Y691 235 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 A8MXK9 166 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 ZG16O60844 167 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 KCNMB1Q16558 191 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 RIPPLY2Q5TAB7 128 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 LAMB2P55268 1798 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 KIAA1217Q5T5P2 1943 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 LY75O60449 1722 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 FXYD3Q14802 87 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 TMEM177Q53S58 311 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 PGLYRP4Q96LB8 373 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 SFXN3Q9BWM7 321 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 TNFRSF19Q9NS68 423 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 USP54Q70EL1 1684 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 MARCH11A6NNE9 402 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 B4E171 279 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 TSPAN7P41732 249 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 ERVFRD-1P60508 538 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 P2RY6Q15077 328 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
CHD4-201ENST00000357008 C4orf51C9J302 202 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 IGHMP01871 453 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 ZNF658BQ4V348 819 aaPredicted RBP12.75□□□□□ -0.37
CHD4-201ENST00000357008 OR8G5Q8NG78 346 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 SFRP2Q96HF1 295 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 SHISA3A0PJX4 238 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 VENTXO95231 258 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 PLAUP00749 431 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 FOXL2P58012 376 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 SMAGPQ0VAQ4 97 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 FAM214BQ7L5A3 538 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 CRISPLD2Q9H0B8 497 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 CRYBB3P26998 211 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 ZNF818PQ6ZRF7 136 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 GPHA2Q96T91 129 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 MCM3APO60318 1980 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 RPS20P60866 119 aaKnown RBP12.75□□□□□ -0.37
CHD4-201ENST00000357008 GUCD1Q96NT3 240 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 IGHV1-45A0A0A0MS14 117 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 RND2P52198 227 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 EFNB1P98172 346 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 DNLZQ5SXM8 178 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 C19orf48Q6RUI8 117 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 OR10AG1Q8NH19 301 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 PRDM14Q9GZV8 571 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 MAP1LC3AQ9H492 121 aa12.75□□□□□ -0.37
CHD4-201ENST00000357008 A0A1B0GV90 55 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 CCL8P80075 99 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 MESP2Q0VG99 397 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 ODAMA1E959 279 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 NPIPB13A6NJU9 1138 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 NPIPB4C9JG80 1138 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 KIAA1644Q3SXP7 199 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 LAMTOR1Q6IAA8 161 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 SLC22A18ASQ8N1D0 253 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 HCP5Q6MZN7 132 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 PMCHL2Q9BQD1 86 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 GREM1O60565 184 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 ZNF324O75467 553 aaPredicted RBP12.74□□□□□ -0.37
CHD4-201ENST00000357008 COX5BP10606 129 aa12.74□□□□□ -0.37
CHD4-201ENST00000357008 GRIFINA4D1Z8 144 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 KRTCAP3Q53RY4 240 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 ZNF826PQ6ZT77 177 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 MIEN1Q9BRT3 115 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 WBP1LQ9NX94 342 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 KLF4O43474 513 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 HIST1H4GQ99525 98 aa12.73□□□□□ -0.37
CHD4-201ENST00000357008 CALYQ9NYX4 217 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms