RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 DDB2Q92466 427 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 PHYHIPLQ96FC7 376 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 SPOCK3Q9BQ16 436 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 ZC4H2Q9NQZ6 224 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 SPTBN1Q01082 2364 aaKnown RBP18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 A0A1W2PPE3 182 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 FAM90A26D6RGX4 464 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 LY6HO94772 140 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 HPRT1P00492 218 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 GNG10P50151 68 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 TLE4Q04727 773 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 LYG1Q8N1E2 194 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 LINC00311Q8N616 119 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 GSX2Q9BZM3 304 aa18.74■□□□□ 0.59
SCAMP3-202ENST00000355379 A0A1W2PPH5 198 aa18.73■□□□□ 0.59
SCAMP3-202ENST00000355379 C1orf229Q6ZS94 237 aaPredicted RBP18.73■□□□□ 0.59
SCAMP3-202ENST00000355379 S1PR3Q99500 378 aa18.73■□□□□ 0.59
SCAMP3-202ENST00000355379 USF3Q68DE3 2245 aa18.73■□□□□ 0.59
SCAMP3-202ENST00000355379 RPS10-NUDT3A0A1W2PQS6 291 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 WRBO00258 174 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 TOR1AO14656 332 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 G6PCP35575 357 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 CDKN1AP38936 164 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 ARHGDIBP52566 201 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 EFNA4P52798 201 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 LINC00205P59089 165 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 RAB14P61106 215 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 VAMP2P63027 116 aa18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 WDR25Q64LD2 544 aaPredicted RBP18.72■□□□□ 0.59
SCAMP3-202ENST00000355379 SSSCA1O60232 199 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 FCGR3BO75015 233 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 KRASP01116 189 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 RBP4P02753 201 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 TPT1P13693 172 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 EIF5AP63241 154 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 IZUMO4Q1ZYL8 232 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 MIDNQ504T8 468 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 ALKAL2Q6UX46 152 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 OR2C3Q8N628 320 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 RAB40CQ96S21 281 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 MAGT1Q9H0U3 335 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 PATZ1Q9HBE1 687 aaKnown RBP18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 DOCK11Q5JSL3 2073 aa18.71■□□□□ 0.59
SCAMP3-202ENST00000355379 FAM90A9PA6NNJ1 464 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 OVOL3O00110 214 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 CHST1O43916 411 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 IGHV1-8P0DP01 117 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 ERVFRD-1P60508 538 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 FAM71F2Q6NXP2 309 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 ZNF833PQ6ZTB9 187 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 H2BFWTQ7Z2G1 175 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 C11orf42Q8N5U0 333 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 SLC25A31Q9H0C2 315 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 LYRM2Q9NU23 88 aaPredicted RBP18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 SESN1Q9Y6P5 492 aa18.7■□□□□ 0.58
SCAMP3-202ENST00000355379 GAPDHP04406 335 aaKnown RBP18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 RNF224P0DH78 156 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 LY6G5BQ8NDX9 201 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 OR4S2Q8NH73 311 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 R3HDM4Q96D70 268 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 CTNNBIP1Q9NSA3 81 aaPredicted RBP18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 FBXL17Q9UF56 701 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 LINC00862A6NCI5 91 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 J3QR06 171 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 PAX9P55771 341 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 BAP18Q8IXM2 172 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 OR9G1Q8NH87 305 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 IGFBPL1Q8WX77 278 aa18.69■□□□□ 0.58
SCAMP3-202ENST00000355379 MARCH11A6NNE9 402 aa18.68■□□□□ 0.58
SCAMP3-202ENST00000355379 SYNGR2O43760 224 aa18.68■□□□□ 0.58
SCAMP3-202ENST00000355379 GPR6P46095 362 aaPredicted RBP18.68■□□□□ 0.58
SCAMP3-202ENST00000355379 RPL23AP62750 156 aaKnown RBP18.68■□□□□ 0.58
SCAMP3-202ENST00000355379 ZNF383Q8NA42 475 aa18.68■□□□□ 0.58
SCAMP3-202ENST00000355379 TNFRSF14Q92956 283 aa18.68■□□□□ 0.58
SCAMP3-202ENST00000355379 TMEM133Q9H2Q1 129 aa18.68■□□□□ 0.58
SCAMP3-202ENST00000355379 PPIAL4CA0A0B4J2A2 164 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 FAM24AA6NFZ4 105 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 MED6O75586 246 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 JTBO76095 146 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 PPIAL4GP0DN37 164 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 ZNF137PP52743 207 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 TAS2R30P59541 319 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 EWSR1Q01844 656 aaKnown RBP eCLIP18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 TAGLNQ01995 201 aaKnown RBP18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 HSPB7Q9UBY9 170 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 WSB1Q9Y6I7 421 aa18.67■□□□□ 0.58
SCAMP3-202ENST00000355379 NXPH3O95157 252 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 TMEM50AO95807 157 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 CT45A6P0DMU7 189 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 CT45A5P0DMU8 189 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 CT45A7P0DMV0 189 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 NQO2P16083 231 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 ERVK-16P61578 105 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 GNB2P62879 340 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 DHRS7BQ6IAN0 325 aaPredicted RBP18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 TMEM252Q8N6L7 170 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 TMEM186Q96B77 213 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 SMIM8Q96KF7 97 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 SLC25A32Q9H2D1 315 aa18.66■□□□□ 0.58
SCAMP3-202ENST00000355379 ARID1AO14497 2285 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms