RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 EIF2S3LQ2VIR3 472 aaKnown RBP9.63□□□□□ -0.87
PTPN2-201ENST00000309660 GCSAMQ8N6F7 178 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 OR10P1Q8NGE3 313 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 SNIP1Q8TAD8 396 aaKnown RBP9.63□□□□□ -0.87
PTPN2-201ENST00000309660 TAF15Q92804 592 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTPN2-201ENST00000309660 MAP1LC3BQ9GZQ8 125 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 WDR61Q9GZS3 305 aaKnown RBP9.63□□□□□ -0.87
PTPN2-201ENST00000309660 CGAP01215 116 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 FGF7P21781 194 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 BRWD1-AS2P59051 145 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF726P1Q15940 193 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 PRAMEF5Q5TYX0 476 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 TMPRSS5Q9H3S3 457 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 FAM215AQ9Y5M1 114 aa9.63□□□□□ -0.87
PTPN2-201ENST00000309660 SMG1Q96Q15 3661 aaKnown RBP9.62□□□□□ -0.87
PTPN2-201ENST00000309660 LRRC75BQ2VPJ9 315 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 DUX4L9Q6RFH8 374 aaPredicted RBP9.62□□□□□ -0.87
PTPN2-201ENST00000309660 R3HDM4Q96D70 268 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 HINT2Q9BX68 163 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 CEACAM1P13688 526 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 NQO2P16083 231 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 UTF1Q5T230 341 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 TM4SF5O14894 197 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 IFNA10P01566 189 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 TFF3Q07654 80 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 MBNL2Q5VZF2 373 aaKnown RBP9.62□□□□□ -0.87
PTPN2-201ENST00000309660 C22orf34Q6ZV56 151 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 ZCCHC24Q8N2G6 241 aaKnown RBP9.62□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF709Q8N972 641 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 ZBTB34Q8NCN2 500 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 PPP1R35Q8TAP8 253 aa9.62□□□□□ -0.87
PTPN2-201ENST00000309660 QTRT1Q9BXR0 403 aaKnown RBP9.62□□□□□ -0.87
PTPN2-201ENST00000309660 MBD3L4A6NDZ8 208 aaPredicted RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 MBD3L3A6NE82 208 aaPredicted RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 MBD3L5A6NJ08 208 aaPredicted RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 CYB5R3P00387 301 aaPredicted RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF506Q5JVG8 444 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 MBD3L2Q8NHZ7 208 aaPredicted RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 TVP23CQ96ET8 276 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 HSPB7Q9UBY9 170 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 YLPM1P49750 1951 aaKnown RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF98A6NK75 572 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 SRRM5B3KS81 715 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 IFNL4K9M1U5 179 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 CLDN14O95500 239 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 HSPB1P04792 205 aaKnown RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 BCL2P10415 239 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 GNG10P50151 68 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 SELENOVP59797 346 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 MZT1Q08AG7 82 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 FABP9Q0Z7S8 132 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 EDARADDQ8WWZ3 215 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 MEGF10Q96KG7 1140 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 LOC102723971A0A1B0GUV8 181 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF737O75373 536 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 IGKV1D-33P01593 117 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 IGKV1-33P01594 117 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 FFAR4Q5NUL3 377 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF561Q8N587 486 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 RPP25LQ8N5L8 163 aaKnown RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 OR5T1Q8NG75 326 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 RPUSD4Q96CM3 377 aaKnown RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 SDSLQ96GA7 329 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 LURAP1Q96LR2 239 aa9.61□□□□□ -0.87
PTPN2-201ENST00000309660 HEYLQ9NQ87 328 aaPredicted RBP9.61□□□□□ -0.87
PTPN2-201ENST00000309660 TLN1Q9Y490 2541 aaKnown RBP9.6□□□□□ -0.87
PTPN2-201ENST00000309660 NDUFA2O43678 99 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 OR9G9P0C7N8 305 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 CCL8P80075 99 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 KHDC3LQ587J8 217 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 TMEM41BQ5BJD5 291 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 TIMM23BQ5SRD1 257 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 C1orf185Q5T7R7 199 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 ACSM6Q6P461 480 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 RBMS3Q6XE24 437 aaKnown RBP9.6□□□□□ -0.87
PTPN2-201ENST00000309660 WFDC8Q8IUA0 241 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 TGIF2LYQ8IUE0 185 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 OR4A16Q8NH70 328 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 PRR7Q8TB68 274 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 HSD17B10Q99714 261 aaKnown RBP9.6□□□□□ -0.87
PTPN2-201ENST00000309660 AGMATQ9BSE5 352 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 MRPL37Q9BZE1 423 aaKnown RBP9.6□□□□□ -0.87
PTPN2-201ENST00000309660 DCAF16Q9NXF7 216 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 MGST3O14880 152 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 SLC31A2O15432 143 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 GZMHP20718 246 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 HOXA1P49639 335 aaPredicted RBP9.6□□□□□ -0.87
PTPN2-201ENST00000309660 TMEM14EPQ6UXP3 125 aa9.6□□□□□ -0.87
PTPN2-201ENST00000309660 FAM90A26D6RGX4 464 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 C15orf65H3BRN8 121 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 ADH4P08319 380 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 ACAA1P09110 424 aaPredicted RBP9.59□□□□□ -0.87
PTPN2-201ENST00000309660 ZNF134P52741 427 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 TNFAIP6P98066 277 aaPredicted RBP9.59□□□□□ -0.87
PTPN2-201ENST00000309660 MORN2Q502X0 79 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 OR10G4Q8NGN3 311 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 OR10G9Q8NGN4 311 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 OR10G7Q8NGN6 311 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 GATAD1Q8WUU5 269 aa9.59□□□□□ -0.87
PTPN2-201ENST00000309660 CCL13Q99616 98 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms