RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 RTL8BQ17RB0 113 aa14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 SLC38A6Q8IZM9 456 aa14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 ZNF486Q96H40 463 aaPredicted RBP14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 CCDC32Q9BV29 185 aa14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 WDR12Q9GZL7 423 aaKnown RBP14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 AKIP1Q9NQ31 210 aa14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 TNFRSF19Q9NS68 423 aa14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 SCP2D1Q9UJQ7 156 aa14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 MOB4Q9Y3A3 225 aa14.35□□□□□ -0.11
SSSCA1-201ENST00000309328 ATRQ13535 2644 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 A0A1B0GUS0 222 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 FAM181BA6NEQ2 426 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 RNF212BA8MTL3 300 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 H0YJW9 148 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 AMY2AP04746 511 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 DUTP33316 252 aaKnown RBP14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 KIR2DS2P43631 304 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 CATR1Q13166 79 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 BVESQ8NE79 360 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 OR4C13Q8NGP0 309 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 TERB2Q8NHR7 220 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 EAF1Q96JC9 268 aaPredicted RBP14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 SCGB3A2Q96PL1 93 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 SLC25A33Q9BSK2 321 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 TINAGL1Q9GZM7 467 aaPredicted RBP14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 SLC2A8Q9NY64 477 aa14.34□□□□□ -0.11
SSSCA1-201ENST00000309328 H7C2Y5 167 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 PROP1O75360 226 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 NDUFA7O95182 113 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 CD40LGP29965 261 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 SURF2Q15527 256 aaPredicted RBP14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 LHFPL1Q86WI0 220 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 MFSD4AQ8N468 514 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 TCTEX1D1Q8N7M0 179 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 OR4C16Q8NGL9 310 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 ZFAND1Q8TCF1 268 aa14.33□□□□□ -0.12
SSSCA1-201ENST00000309328 IGHV3-72A0A0B4J1Y9 119 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 NAP1L6A6NFF2 107 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 J3QRK9 145 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 GPR31O00270 319 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 SPDEFO95238 335 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 IGLV2-14P01704 120 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 HKR1P10072 659 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 GNRHRP30968 328 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 KLF9Q13886 244 aaPredicted RBP14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 C11orf88Q6PI97 169 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 KCTD9Q7L273 389 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 Q8N6K4 173 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 ZNF383Q8NA42 475 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 POC5Q8NA72 575 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 OR4F5Q8NH21 305 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 CD300LFQ8TDQ1 290 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 FLYWCH2Q96CP2 140 aaKnown RBP14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 TSNAXQ99598 290 aaKnown RBP14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 C7orf50Q9BRJ6 194 aaKnown RBP14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 SLC35D1Q9NTN3 355 aa14.32□□□□□ -0.12
SSSCA1-201ENST00000309328 CENPXA8MT69 81 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 TSPAN9O75954 239 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 CD24P25063 80 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 LGALS7P47929 136 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 PPP5CP53041 499 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 FOXL1Q12952 345 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 ZNF846Q147U1 533 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 SCGB2B2Q4G0G5 96 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 AADACL3Q5VUY0 350 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 ZNF57Q68EA5 555 aaPredicted RBP14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 CCBE1Q6UXH8 406 aaPredicted RBP14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 TMEM219Q86XT9 240 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 AIFM2Q9BRQ8 373 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 RSRP1Q9BUV0 290 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 FXYD6Q9H0Q3 95 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 CCL28Q9NRJ3 127 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 MCUBQ9NWR8 336 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 KIAA1456Q9P272 454 aa14.31□□□□□ -0.12
SSSCA1-201ENST00000309328 RBFOX2O43251 390 aaKnown RBP eCLIP14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 CHST1O43916 411 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 ZNF735P0CB33 412 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 EIF4EBP1Q13541 118 aaPredicted RBP14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 MMDQ15546 238 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 ABCA11PQ4W5N1 156 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 ZNF818PQ6ZRF7 136 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 DRAXINQ8NBI3 349 aaPredicted RBP14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 OR4D10Q8NGI6 311 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 OR4S2Q8NH73 311 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 OSR1Q8TAX0 266 aaPredicted RBP14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 TCTEX1D2Q8WW35 142 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 DDB2Q92466 427 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 C5orf30Q96GV9 206 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 PRSS22Q9GZN4 317 aa14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 FAM212BQ9NTI7 297 aaPredicted RBP14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 LIN7CQ9NUP9 197 aaKnown RBP14.3□□□□□ -0.12
SSSCA1-201ENST00000309328 NCBP2LA6PVI3 153 aaKnown RBP14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 NBR2O15453 112 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 B3GALNT1O75752 331 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 PGAM2P15259 253 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 RAG2P55895 527 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 HNF4GQ14541 408 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 CCDC71LQ8N9Z2 235 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 NPBQ8NG41 125 aa14.29□□□□□ -0.12
SSSCA1-201ENST00000309328 OR51S1Q8NGJ8 323 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms