RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 CR1P17927 2039 aa15.37■□□□□ 0.05
PDLIM3-202ENST00000284770 ODF3BA8MYP8 253 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 H0Y980 276 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 BUB1B-PAK6H3BSN5 160 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 ADAP1O75689 374 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 ARG1P05089 322 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 IL3RAP26951 378 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 ZNF833PQ6ZTB9 187 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 OR51H1Q8NH63 302 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 LHFPL5Q8TAF8 219 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 ASB13Q8WXK3 278 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 ST6GALNAC6Q969X2 333 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 AMMECR1Q9Y4X0 333 aaPredicted RBP15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 WNK2Q9Y3S1 2297 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 RNF212BA8MTL3 300 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 M0R1X1 148 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 UCP1P25874 307 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 DUTP33316 252 aaKnown RBP15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 UBE2E1P51965 193 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 CYB5R2Q6BCY4 276 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 FAM71F2Q6NXP2 309 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 PDZD9Q8IXQ8 264 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 OR2T35Q8NGX2 323 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 LHX4Q969G2 390 aa15.36■□□□□ 0.05
PDLIM3-202ENST00000284770 B3GALNT1O75752 331 aa15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 NKX2-5P52952 324 aaPredicted RBP15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 RPL30P62888 115 aaKnown RBP15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 CATR1Q13166 79 aa15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 Q5BKY6 102 aa15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 NOXA1Q86UR1 476 aa15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 C18orf12Q96KH6 178 aa15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 TMEM56Q96MV1 263 aa15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 TMEM56-RWDD3S4R434 201 aa15.35■□□□□ 0.05
PDLIM3-202ENST00000284770 LINC00473A8K010 186 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 J3QLI3 93 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 LGI3Q8N145 548 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 DRAXINQ8NBI3 349 aaPredicted RBP15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 LIN7CQ9NUP9 197 aaKnown RBP15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 CENPVL3A0A0U1RRI6 287 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 MPTX1A8MV57 137 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 LY6LH3BQJ8 138 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 CDS2O95674 445 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 HOXB5P09067 269 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 ZNF16P17020 682 aaPredicted RBP15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 HTR1DP28221 377 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 LINC00205P59089 165 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 SRPXP78539 464 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 TCTEX1D2Q8WW35 142 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 SEC22AQ96IW7 307 aa15.34■□□□□ 0.05
PDLIM3-202ENST00000284770 FAM25EA8MYX2 175 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 SMAD7O15105 426 aaKnown RBP15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 CT45A6P0DMU7 189 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 CT45A5P0DMU8 189 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 CT45A7P0DMV0 189 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 DIAPH2-AS1Q14236 149 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 GSG1LQ6UXU4 331 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 LYZL2Q7Z4W2 148 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 TCTEX1D1Q8N7M0 179 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 ADTRPQ96IZ2 230 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 OR10C1Q96KK4 312 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 DPM3Q9P2X0 92 aa15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.33■□□□□ 0.04
PDLIM3-202ENST00000284770 CREBBPQ92793 2442 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 A0A1W2PRD5 423 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 A0A1W2PRF3 423 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 A0A1W2PRM7 423 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 LEUTXA8MZ59 168 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 THBS3P49746 956 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 LDLRAD2Q5SZI1 272 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 GGNBP1Q5YKI7 109 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 TGIF2LXQ8IUE1 241 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 SELENOHQ8IZQ5 122 aaKnown RBP15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 ZNF383Q8NA42 475 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 OR11H4Q8NGC9 324 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 RANBP3Q9H6Z4 567 aaPredicted RBP15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 ITPR3Q14573 2671 aa15.32■□□□□ 0.04
PDLIM3-202ENST00000284770 C13orf42A0A1B0GVH6 325 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 C5orf51A6NDU8 294 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 CEACAM3P40198 252 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 REG1BP48304 166 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 LGALS4P56470 323 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 BRWD1-AS2P59051 145 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 MINOS1Q5TGZ0 78 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 TMEM268Q5VZI3 342 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 SLC35G3Q8N808 338 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 DDB2Q92466 427 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 IL22RA2Q969J5 263 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 RPEQ96AT9 228 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 PDCD10Q9BUL8 212 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 FAM212BQ9NTI7 297 aaPredicted RBP15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 PRELID3BQ9Y3B1 194 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 MINOS1-NBL1R4GNA1 71 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 NOTCH2Q04721 2471 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 AVPP01185 164 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 GAPDHP04406 335 aaKnown RBP15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 MIDNQ504T8 468 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 ZNF585BQ52M93 769 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 LHFPL4Q7Z7J7 247 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 HYLS1Q96M11 299 aa15.31■□□□□ 0.04
PDLIM3-202ENST00000284770 MRPL20Q9BYC9 149 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms