RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 RAB29O14966 203 aa16.74■□□□□ 0.27
RTCA-201ENST00000260563 SAA2P0DJI9 122 aaPredicted RBP16.74■□□□□ 0.27
RTCA-201ENST00000260563 IL3RAP26951 378 aa16.74■□□□□ 0.27
RTCA-201ENST00000260563 CEACAM3P40198 252 aa16.74■□□□□ 0.27
RTCA-201ENST00000260563 DEFB112Q30KQ8 113 aa16.74■□□□□ 0.27
RTCA-201ENST00000260563 SGPP2Q8IWX5 399 aa16.74■□□□□ 0.27
RTCA-201ENST00000260563 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.74■□□□□ 0.27
RTCA-201ENST00000260563 C17orf50Q8WW18 174 aa16.74■□□□□ 0.27
RTCA-201ENST00000260563 DPM3Q9P2X0 92 aa16.74■□□□□ 0.27
RTCA-201ENST00000260563 A0A0A6YYJ9 748 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 TEX13DA0A0J9YY54 714 aaPredicted RBP16.73■□□□□ 0.27
RTCA-201ENST00000260563 C7orf66A4D0T2 115 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 MPPED1O15442 326 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 PGLYRP1O75594 196 aaPredicted RBP16.73■□□□□ 0.27
RTCA-201ENST00000260563 HLA-AP01891 365 aaKnown RBP16.73■□□□□ 0.27
RTCA-201ENST00000260563 VAMP1P23763 118 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 DHRS2Q13268 280 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 LDLRAD2Q5SZI1 272 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 TBC1D26Q86UD7 250 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 OR52B4Q8NGK2 314 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 MALSU1Q96EH3 234 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 ZNF48Q96MX3 618 aaPredicted RBP16.73■□□□□ 0.27
RTCA-201ENST00000260563 GPHA2Q96T91 129 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 NAA60Q9H7X0 242 aa16.73■□□□□ 0.27
RTCA-201ENST00000260563 hCG_2014768A0A024R1R8 64 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 SUPT4H1P63272 117 aaKnown RBP16.72■□□□□ 0.27
RTCA-201ENST00000260563 CBX3Q13185 183 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 EIF4EBP1Q13541 118 aaPredicted RBP16.72■□□□□ 0.27
RTCA-201ENST00000260563 SSX2Q16385 188 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 RPL39P5Q59GN2 51 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 C11orf88Q6PI97 169 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 RBMS3Q6XE24 437 aaKnown RBP16.72■□□□□ 0.27
RTCA-201ENST00000260563 LYG2Q86SG7 212 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 ZDHHC16Q969W1 377 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 RPEQ96AT9 228 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 AJUBAQ96IF1 538 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 HILPDAQ9Y5L2 63 aa16.72■□□□□ 0.27
RTCA-201ENST00000260563 C9orf170A2RU37 121 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 SNRPGP15A8MWD9 76 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 PROP1O75360 226 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 SFT2D2O95562 160 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 TPTE2P1Q5T6R2 138 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 SIGLECL1Q8N7X8 197 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 ZNF431Q8TF32 576 aaPredicted RBP16.71■□□□□ 0.27
RTCA-201ENST00000260563 ZNF418Q8TF45 676 aaPredicted RBP16.71■□□□□ 0.27
RTCA-201ENST00000260563 S1PR3Q99500 378 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 ZNF251Q9BRH9 671 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 KCNIP3Q9Y2W7 256 aa16.71■□□□□ 0.27
RTCA-201ENST00000260563 CREBL2O60519 120 aaPredicted RBP16.7■□□□□ 0.26
RTCA-201ENST00000260563 TUSC1Q2TAM9 212 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 ZNF66Q6ZN08 573 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 ZNF833PQ6ZTB9 187 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 KCTD9Q7L273 389 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 GALNT14Q96FL9 552 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 HSD17B10Q99714 261 aaKnown RBP16.7■□□□□ 0.26
RTCA-201ENST00000260563 C3orf85A0A1B0GTC6 90 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 RNF212BA8MTL3 300 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 LY6LH3BQJ8 138 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 M0R1X1 148 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 IFNA2P01563 188 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 ANXA3P12429 323 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 F2RP25116 425 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 PAX6P26367 422 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 ARHGDIBP52566 201 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 ZNF137PP52743 207 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 SLC9A3R2Q15599 337 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 FAM71F2Q6NXP2 309 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 DYNAPQ8N1N2 210 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 OR51H1Q8NH63 302 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 CASTOR1Q8WTX7 329 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 MEGF9Q9H1U4 602 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 OR51J1Q9H342 316 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 PRDM13Q9H4Q3 707 aa16.7■□□□□ 0.26
RTCA-201ENST00000260563 OOSP1A8MZH6 123 aa16.69■□□□□ 0.26
RTCA-201ENST00000260563 OR5AC1P0C628 307 aa16.69■□□□□ 0.26
RTCA-201ENST00000260563 DUTP33316 252 aaKnown RBP16.69■□□□□ 0.26
RTCA-201ENST00000260563 CATR1Q13166 79 aa16.69■□□□□ 0.26
RTCA-201ENST00000260563 CCDC144NLQ6NUI1 221 aa16.69■□□□□ 0.26
RTCA-201ENST00000260563 ST6GALNAC6Q969X2 333 aa16.69■□□□□ 0.26
RTCA-201ENST00000260563 H0Y980 276 aa16.68■□□□□ 0.26
RTCA-201ENST00000260563 DUS4LO95620 317 aaKnown RBP16.68■□□□□ 0.26
RTCA-201ENST00000260563 RPL30P62888 115 aaKnown RBP16.68■□□□□ 0.26
RTCA-201ENST00000260563 ZNF816Q0VGE8 651 aaPredicted RBP16.68■□□□□ 0.26
RTCA-201ENST00000260563 DIAPH2-AS1Q14236 149 aa16.68■□□□□ 0.26
RTCA-201ENST00000260563 SP6Q3SY56 376 aa16.68■□□□□ 0.26
RTCA-201ENST00000260563 Q6YL49 198 aa16.68■□□□□ 0.26
RTCA-201ENST00000260563 DRAXINQ8NBI3 349 aaPredicted RBP16.68■□□□□ 0.26
RTCA-201ENST00000260563 MITD1Q8WV92 249 aa16.68■□□□□ 0.26
RTCA-201ENST00000260563 TP53RKQ96S44 253 aa16.68■□□□□ 0.26
RTCA-201ENST00000260563 LIN7CQ9NUP9 197 aaKnown RBP16.68■□□□□ 0.26
RTCA-201ENST00000260563 NIPBLQ6KC79 2804 aaeCLIP16.67■□□□□ 0.26
RTCA-201ENST00000260563 TXNL1O43396 289 aa16.67■□□□□ 0.26
RTCA-201ENST00000260563 B3GALNT1O75752 331 aa16.67■□□□□ 0.26
RTCA-201ENST00000260563 LRRC75BQ2VPJ9 315 aa16.67■□□□□ 0.26
RTCA-201ENST00000260563 TCTEX1D2Q8WW35 142 aa16.67■□□□□ 0.26
RTCA-201ENST00000260563 PHB2Q99623 299 aa16.67■□□□□ 0.26
RTCA-201ENST00000260563 LINC00473A8K010 186 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 TCF21O43680 179 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 SSNA1O43805 119 aa16.66■□□□□ 0.26
RTCA-201ENST00000260563 GAPDHP04406 335 aaKnown RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms