RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 ADH4P08319 380 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 OPN1MW2P0DN77 364 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 OPN1MW3P0DN78 364 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 FABP4P15090 132 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 LRRC75BQ2VPJ9 315 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 SLC35E4Q6ICL7 350 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 TRAT1Q6PIZ9 186 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 Q8NFD4 153 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 AURKAIP1Q9NWT8 199 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 NAT8Q9UHE5 227 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 TRGV10A0A0A0MS01 117 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 A0A1W2PNU3 283 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 MEF2BQ02080 365 aaPredicted RBP12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 H1FXQ92522 213 aaKnown RBP12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 OR2V2Q96R30 315 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 PRO3102Q9H379 93 aa12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 PATZ1Q9HBE1 687 aaKnown RBP12.59□□□□□ -0.39
UBE2D4-201ENST00000222402 TRAV20A0A0B4J274 112 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 CD82P27701 267 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 CHRNA7P36544 502 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 SPSB3Q6PJ21 355 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 WFDC8Q8IUA0 241 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 PSMG3Q9BT73 122 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 INTS1Q8N201 2190 aaKnown RBP12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 TRBV6-6A0A0A6YYG2 114 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 MDFIC2A0A1B0GVS7 189 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 SS18L1O75177 396 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 KDF1Q8NAX2 398 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 CLDN14O95500 239 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 PTBP3O95758 552 aaKnown RBP12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 ACAA1P09110 424 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 PAX9P55771 341 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 ZNF146Q15072 292 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 VKORC1L1Q8N0U8 176 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 LEAP2Q969E1 77 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 NEIL1Q96FI4 390 aaPredicted RBP12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 SNX22Q96L94 193 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 DOK5Q9P104 306 aa12.58□□□□□ -0.4
UBE2D4-201ENST00000222402 ZNF891A8MT65 544 aaPredicted RBP12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 GALR1P47211 349 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 WDR86Q86TI4 376 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 ZNRF1Q8ND25 227 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 TMEM37Q8WXS4 190 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 CISD1Q9NZ45 108 aaKnown RBP12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 KLK10O43240 276 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 HOXB1P14653 301 aaPredicted RBP12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 FOXF2Q12947 444 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 FAM53AQ6NSI3 398 aaPredicted RBP12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 SSMEM1Q8WWF3 244 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 RAB24Q969Q5 203 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 C11orf94C9JXX5 98 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 RPL30P62888 115 aaKnown RBP12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 ARL16Q0P5N6 197 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 USF2Q15853 346 aaPredicted RBP12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 ZNF66Q6ZN08 573 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 Q8WTZ3 238 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 OR6C3Q9NZP0 311 aa12.57□□□□□ -0.4
UBE2D4-201ENST00000222402 CYB5R3P00387 301 aaPredicted RBP12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 TNFAIP6P98066 277 aaPredicted RBP12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 P2RY6Q15077 328 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 WDR82Q6UXN9 313 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 MGST3O14880 152 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 NDUFA2O43678 99 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 LINC00205P59089 165 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 RPL19P84098 196 aaKnown RBP12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 ZNF585BQ52M93 769 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 LYPD6BQ8NI32 183 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 ZDHHC11Q9H8X9 412 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 METTL1Q9UBP6 276 aaKnown RBP12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 RNF115Q9Y4L5 304 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 RAB29O14966 203 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 ACTL6BO94805 426 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 ITLN1Q8WWA0 313 aa12.56□□□□□ -0.4
UBE2D4-201ENST00000222402 ZNF318Q5VUA4 2279 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 AHRRA9YTQ3 701 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 TGOLN2O43493 480 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 IGKV1-39P01597 117 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 IGKV1D-39P04432 117 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 CD1BP29016 333 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 WDR25Q64LD2 544 aaPredicted RBP12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 MRPL41Q8IXM3 137 aaKnown RBP12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 DYNLRB1Q9NP97 96 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 KCNIP2Q9NS61 270 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 VPS13AQ96RL7 3174 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 IGHV2OR16-5A0A0B4J2B6 119 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 FOLR2P14207 255 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 TFF3Q07654 80 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 FAM201AQ5SY85 155 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 METRNQ9UJH8 293 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 MYO15AQ9UKN7 3530 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 MLNRO43193 412 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 RAB4BP61018 213 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 MRPS11P82912 194 aaKnown RBP12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 OR4S2Q8NH73 311 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 UHRF2Q96PU4 802 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 MANBALQ9NQG1 85 aa12.55□□□□□ -0.4
UBE2D4-201ENST00000222402 TRAV38-1A0A0B4J264 116 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 SEC14L6B5MCN3 397 aa12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 KIR2DL2P43627 348 aaPredicted RBP12.54□□□□□ -0.4
UBE2D4-201ENST00000222402 DEFA6Q01524 100 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 214 ms