RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 KCTD9Q7L273 389 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 OR11H6Q8NGC7 330 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 OR51H1Q8NH63 302 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 C5orf30Q96GV9 206 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 HIF1ANQ9NWT6 349 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 AMMECR1Q9Y4X0 333 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-210ENST00000641115 M0R1X1 148 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 SSNA1O43805 119 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 DUS4LO95620 317 aaKnown RBP16.16■□□□□ 0.18
PHGDH-210ENST00000641115 IGLV1-47P01700 117 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 HOXB4P17483 251 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-210ENST00000641115 F2RP25116 425 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 GZMKP49863 264 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 KLRD1Q13241 179 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 ZNF66Q6ZN08 573 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 GALNT14Q96FL9 552 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 TBX15Q96SF7 602 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 PHB2Q99623 299 aa16.16■□□□□ 0.18
PHGDH-210ENST00000641115 LIN7CQ9NUP9 197 aaKnown RBP16.16■□□□□ 0.18
PHGDH-210ENST00000641115 PDZD2O15018 2839 aa16.15■□□□□ 0.18
PHGDH-210ENST00000641115 ASH1LQ9NR48 2969 aaKnown RBP16.15■□□□□ 0.18
PHGDH-210ENST00000641115 ARG1P05089 322 aa16.15■□□□□ 0.18
PHGDH-210ENST00000641115 OR5AC1P0C628 307 aa16.15■□□□□ 0.18
PHGDH-210ENST00000641115 ZNF16P17020 682 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-210ENST00000641115 CADM3Q8N126 398 aa16.15■□□□□ 0.18
PHGDH-210ENST00000641115 MSI2Q96DH6 328 aaKnown RBP16.15■□□□□ 0.18
PHGDH-210ENST00000641115 WNK2Q9Y3S1 2297 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 MED13LQ71F56 2210 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 H0Y980 276 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 B3GALNT1O75752 331 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 TGFAP01135 160 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 IGHV4-31P0DP07 118 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 BCAP31P51572 246 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 EIF4EBP1Q13541 118 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-210ENST00000641115 HCP5Q6MZN7 132 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 FAM71F2Q6NXP2 309 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 COQ8AQ8NI60 647 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 MITD1Q8WV92 249 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 TCTEX1D2Q8WW35 142 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 TP53RKQ96S44 253 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 ZNF251Q9BRH9 671 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 MED28Q9H204 178 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 AUP1Q9Y679 476 aa16.14■□□□□ 0.17
PHGDH-210ENST00000641115 RNASEK-C17orf49H0YIS7 233 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 PROP1O75360 226 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 ZNF137PP52743 207 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 SP6Q3SY56 376 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 ZNF833PQ6ZTB9 187 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 PDZD9Q8IXQ8 264 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 C12orf45Q8N5I9 185 aaPredicted RBP16.13■□□□□ 0.17
PHGDH-210ENST00000641115 UXS1Q8NBZ7 420 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 OR4P4Q8NGL7 312 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 LHX4Q969G2 390 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 C7orf69Q9H7B7 122 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 ITGB1BP2Q9UKP3 347 aa16.13■□□□□ 0.17
PHGDH-210ENST00000641115 BUB1B-PAK6H3BSN5 160 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 DUTP33316 252 aaKnown RBP16.12■□□□□ 0.17
PHGDH-210ENST00000641115 RRAS2P62070 204 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-210ENST00000641115 DRAXINQ8NBI3 349 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-210ENST00000641115 ADTRPQ96IZ2 230 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 VPS13CQ709C8 3753 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 ODF3BA8MYP8 253 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 HTR1DP28221 377 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 THBS3P49746 956 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 SRPXP78539 464 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 C1orf229Q6ZS94 237 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-210ENST00000641115 ST6GALNAC6Q969X2 333 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 TMEM222Q9H0R3 208 aa16.12■□□□□ 0.17
PHGDH-210ENST00000641115 ITPR2Q14571 2701 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 LINC00473A8K010 186 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 J3QLI3 93 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 SERPINE2P07093 398 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 CEACAM3P40198 252 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 UBE2E1P51965 193 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 LGALS4P56470 323 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 RPL30P62888 115 aaKnown RBP16.11■□□□□ 0.17
PHGDH-210ENST00000641115 TMEM187Q14656 261 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 ANKRD55Q3KP44 614 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 CYB5R2Q6BCY4 276 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 LIN54Q6MZP7 749 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 TGIF2LXQ8IUE1 241 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 TCTEX1D1Q8N7M0 179 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 GLYATL2Q8WU03 294 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 PRR13Q9NZ81 148 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 PRELID3BQ9Y3B1 194 aa16.11■□□□□ 0.17
PHGDH-210ENST00000641115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.11■□□□□ 0.179e-8■□□□□ 11
PHGDH-210ENST00000641115 A0A0B4J2A0 478 aa16.1■□□□□ 0.17
PHGDH-210ENST00000641115 LEUTXA8MZ59 168 aa16.1■□□□□ 0.17
PHGDH-210ENST00000641115 UCP1P25874 307 aa16.1■□□□□ 0.17
PHGDH-210ENST00000641115 LIAT1Q6ZQX7 453 aa16.1■□□□□ 0.17
PHGDH-210ENST00000641115 LGI3Q8N145 548 aa16.1■□□□□ 0.17
PHGDH-210ENST00000641115 RPEQ96AT9 228 aa16.1■□□□□ 0.17
PHGDH-210ENST00000641115 SHPKQ9UHJ6 478 aa16.1■□□□□ 0.17
PHGDH-210ENST00000641115 PIGBOS1A0A0B4J2F0 54 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 A0A1W2PRD5 423 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 A0A1W2PRF3 423 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 A0A1W2PRM7 423 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 SMAD7O15105 426 aaKnown RBP16.09■□□□□ 0.17
PHGDH-210ENST00000641115 TXNL1O43396 289 aa16.09■□□□□ 0.17
PHGDH-210ENST00000641115 REG1BP48304 166 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms