RNA–Protein interactions for RNA: ENST00000625767.1

CCNA1-203, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-203ENST00000625767 ADAD2Q8NCV1 583 aaKnown RBP13.42□□□□□ -0.26
CCNA1-203ENST00000625767 RTBDNQ9BSG5 229 aaPredicted RBP13.42□□□□□ -0.26
CCNA1-203ENST00000625767 RSRP1Q9BUV0 290 aa13.42□□□□□ -0.26
CCNA1-203ENST00000625767 MRPL20Q9BYC9 149 aaKnown RBP13.42□□□□□ -0.26
CCNA1-203ENST00000625767 C5orf66Q9H5L9 145 aa13.42□□□□□ -0.26
CCNA1-203ENST00000625767 PALMDQ9NP74 551 aa13.42□□□□□ -0.26
CCNA1-203ENST00000625767 DPM3Q9P2X0 92 aa13.42□□□□□ -0.26
CCNA1-203ENST00000625767 ZNF221Q9UK13 617 aa13.42□□□□□ -0.26
CCNA1-203ENST00000625767 NUP50Q9UKX7 468 aa13.42□□□□□ -0.26
CCNA1-203ENST00000625767 NIPBLQ6KC79 2804 aaeCLIP13.42□□□□□ -0.26
CCNA1-203ENST00000625767 LINC00473A8K010 186 aa13.41□□□□□ -0.26
CCNA1-203ENST00000625767 ZNF137PP52743 207 aa13.41□□□□□ -0.26
CCNA1-203ENST00000625767 RPL30P62888 115 aaKnown RBP13.41□□□□□ -0.26
CCNA1-203ENST00000625767 PIPOXQ9P0Z9 390 aa13.41□□□□□ -0.26
CCNA1-203ENST00000625767 GPR132Q9UNW8 380 aa13.41□□□□□ -0.26
CCNA1-203ENST00000625767 IGHV3-72A0A0B4J1Y9 119 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 FAM240BA0A1B0GVZ2 78 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 INAFM1C9JVW0 142 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 M0R1X1 148 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 NDUFB6O95139 128 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 UCP3P55916 312 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 DEFA1P59665 94 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 DEFA3P59666 94 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 EIF4EBP1Q13541 118 aaPredicted RBP13.4□□□□□ -0.26
CCNA1-203ENST00000625767 RBMS2Q15434 407 aaKnown RBP13.4□□□□□ -0.26
CCNA1-203ENST00000625767 MIDNQ504T8 468 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 MZT2BQ6NZ67 158 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 RTN4IP1Q8WWV3 396 aaPredicted RBP13.4□□□□□ -0.26
CCNA1-203ENST00000625767 TRAV6A0A075B6T7 132 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 LEUTXA8MZ59 168 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 TCRBP04435 133 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 RLN1P04808 185 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 CT45A6P0DMU7 189 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 CT45A5P0DMU8 189 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 CT45A7P0DMV0 189 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 CD24P25063 80 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 TMED4Q7Z7H5 227 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 TMEM230Q96A57 120 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 RPEQ96AT9 228 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 BEX2Q9BXY8 128 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 DPAGT1Q9H3H5 408 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 BEX1Q9HBH7 125 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 SLC2A9Q9NRM0 540 aa13.4□□□□□ -0.26
CCNA1-203ENST00000625767 TBL2Q9Y4P3 447 aaKnown RBP13.4□□□□□ -0.26
CCNA1-203ENST00000625767 AMMECR1Q9Y4X0 333 aaPredicted RBP13.4□□□□□ -0.26
CCNA1-203ENST00000625767 A0A1W2PPI3 338 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 ARPC1BO15143 372 aaKnown RBP13.39□□□□□ -0.27
CCNA1-203ENST00000625767 RAB13P51153 203 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 OR2B11Q5JQS5 317 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 MINOS1Q5TGZ0 78 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 TGIF2LXQ8IUE1 241 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 SLC38A6Q8IZM9 456 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 BVESQ8NE79 360 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 ENKURQ8TC29 256 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 ZNF48Q96MX3 618 aaPredicted RBP13.39□□□□□ -0.27
CCNA1-203ENST00000625767 MS4A7Q9GZW8 240 aaPredicted RBP13.39□□□□□ -0.27
CCNA1-203ENST00000625767 C20orf85Q9H1P6 137 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 NUDT15Q9NV35 164 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 MINOS1-NBL1R4GNA1 71 aa13.39□□□□□ -0.27
CCNA1-203ENST00000625767 NF1P21359 2839 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 IGHV1-3A0A0C4DH29 117 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 GPR31O00270 319 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 ANXA7P20073 488 aaKnown RBP13.38□□□□□ -0.27
CCNA1-203ENST00000625767 DUTP33316 252 aaKnown RBP13.38□□□□□ -0.27
CCNA1-203ENST00000625767 SRP14P37108 136 aaKnown RBP13.38□□□□□ -0.27
CCNA1-203ENST00000625767 PIGPP57054 158 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 RAB25P57735 213 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 DEFB112Q30KQ8 113 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 ZNF383Q8NA42 475 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 OR51H1Q8NH63 302 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 CAPSLQ8WWF8 208 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 S1PR3Q99500 378 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 NABP2Q9BQ15 211 aa13.38□□□□□ -0.27
CCNA1-203ENST00000625767 SLC25A21Q9BQT8 299 aaPredicted RBP13.38□□□□□ -0.27
CCNA1-203ENST00000625767 TIMM23O14925 209 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 PGLYRP1O75594 196 aaPredicted RBP13.37□□□□□ -0.27
CCNA1-203ENST00000625767 CTSDP07339 412 aaPredicted RBP13.37□□□□□ -0.27
CCNA1-203ENST00000625767 IL3RAP26951 378 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 BRWD1-AS2P59051 145 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 ZNF816Q0VGE8 651 aaPredicted RBP13.37□□□□□ -0.27
CCNA1-203ENST00000625767 TBC1D26Q86UD7 250 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.37□□□□□ -0.27
CCNA1-203ENST00000625767 MALSU1Q96EH3 234 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 GAB2Q9UQC2 676 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 GAPDHP04406 335 aaKnown RBP13.37□□□□□ -0.27
CCNA1-203ENST00000625767 AKR1C4P17516 323 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 CEACAM3P40198 252 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 SURF2Q15527 256 aaPredicted RBP13.37□□□□□ -0.27
CCNA1-203ENST00000625767 MOB3BQ86TA1 216 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 ZDHHC22Q8N966 263 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 DUSP18Q8NEJ0 188 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 ZFAND1Q8TCF1 268 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 ZFAND2BQ8WV99 257 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 CFHR4Q92496 578 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 TMEM160Q9NX00 188 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 PRR13Q9NZ81 148 aa13.37□□□□□ -0.27
CCNA1-203ENST00000625767 C14orf166Q9Y224 244 aaKnown RBP13.37□□□□□ -0.27
CCNA1-203ENST00000625767 VSIG10L2P0DP72 767 aa13.36□□□□□ -0.27
CCNA1-203ENST00000625767 ECI1P42126 302 aa13.36□□□□□ -0.27
CCNA1-203ENST00000625767 RGS21Q2M5E4 152 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms