RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 TOMM40LQ969M1 308 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 RSRP1Q9BUV0 290 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 SLC5A7Q9GZV3 580 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 GSX1Q9H4S2 264 aaPredicted RBP9.94□□□□□ -0.82
TGFB1-204ENST00000600196 PITPNC1Q9UKF7 332 aa9.94□□□□□ -0.82
TGFB1-204ENST00000600196 SAA2-SAA4A0A096LPE2 208 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 OR5H14A6NHG9 310 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 M0QYG6 137 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 GPR31O00270 319 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 SLC31A2O15432 143 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 RBFOX2O43251 390 aaKnown RBP eCLIP9.93□□□□□ -0.82
TGFB1-204ENST00000600196 CTSDP07339 412 aaPredicted RBP9.93□□□□□ -0.82
TGFB1-204ENST00000600196 FAM106CPP0CH98 169 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 SAA2P0DJI9 122 aaPredicted RBP9.93□□□□□ -0.82
TGFB1-204ENST00000600196 GNRHRP30968 328 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 KIR2DS2P43631 304 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 RAB13P51153 203 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 CATR1Q13166 79 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 RBMS2Q15434 407 aaKnown RBP9.93□□□□□ -0.82
TGFB1-204ENST00000600196 RNASE12Q5GAN4 147 aaKnown RBP9.93□□□□□ -0.82
TGFB1-204ENST00000600196 DHRS7BQ6IAN0 325 aaPredicted RBP9.93□□□□□ -0.82
TGFB1-204ENST00000600196 C16orf82Q7Z2V1 217 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 CADM3Q8N126 398 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 DRAM1Q8N682 238 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 OR8H1Q8NGG4 311 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 OR5AN1Q8NGI8 311 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 OR51S1Q8NGJ8 323 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 SSMEM1Q8WWF3 244 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 LEAP2Q969E1 77 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 AIFM2Q9BRQ8 373 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 OR2D2Q9H210 308 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 SDHAF2Q9NX18 166 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 ZNRD1Q9P1U0 126 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 GPR132Q9UNW8 380 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 PRELID3BQ9Y3B1 194 aa9.93□□□□□ -0.82
TGFB1-204ENST00000600196 ZNF469Q96JG9 3925 aaPredicted RBP9.92□□□□□ -0.82
TGFB1-204ENST00000600196 IGHV1-3A0A0C4DH29 117 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 A0A0U1RQK1 487 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 PLA2G10O15496 165 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 LYRM1O43325 122 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 PROP1O75360 226 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 IFNA2P01563 188 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 UBE2MP61081 183 aaKnown RBP9.92□□□□□ -0.82
TGFB1-204ENST00000600196 SSX2Q16385 188 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 LRRC75BQ2VPJ9 315 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 BRD3OSQ6XYD6 125 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 IDO2Q6ZQW0 420 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 C5orf24Q7Z6I8 188 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 CCDC71LQ8N9Z2 235 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 OR4D10Q8NGI6 311 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 OR56B4Q8NH76 319 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 ZDHHC16Q969W1 377 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 NABP2Q9BQ15 211 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 ALX4Q9H161 411 aaPredicted RBP9.92□□□□□ -0.82
TGFB1-204ENST00000600196 RAB18Q9NP72 206 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 ABCB10Q9NRK6 738 aa9.92□□□□□ -0.82
TGFB1-204ENST00000600196 SONP18583 2426 aaKnown RBP9.91□□□□□ -0.82
TGFB1-204ENST00000600196 IGKV1D-13A0A0B4J2D9 117 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 A0A1W2PPI3 338 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 BTBD17A6NE02 478 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 INAFM1C9JVW0 142 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 NDUFB6O95139 128 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 IGLV2-14P01704 120 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 IGKV1-13P0DP09 117 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 SLC6A1P30531 599 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 DUTP33316 252 aaKnown RBP9.91□□□□□ -0.82
TGFB1-204ENST00000600196 IER3P46695 156 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 LGALS7P47929 136 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 CBX3Q13185 183 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 EIF4EBP1Q13541 118 aaPredicted RBP9.91□□□□□ -0.82
TGFB1-204ENST00000600196 SCGB2B2Q4G0G5 96 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 LDLRAD2Q5SZI1 272 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 UTF1Q5T230 341 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 C16orf87Q6PH81 154 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 LHFPL4Q7Z7J7 247 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 PDPNQ86YL7 162 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 DUSP18Q8NEJ0 188 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 OR13C8Q8NGS7 320 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 SECTM1Q8WVN6 248 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 ABHD14BQ96IU4 210 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 PARP12Q9H0J9 701 aaKnown RBP9.91□□□□□ -0.82
TGFB1-204ENST00000600196 MCUBQ9NWR8 336 aa9.91□□□□□ -0.82
TGFB1-204ENST00000600196 C14orf166Q9Y224 244 aaKnown RBP9.91□□□□□ -0.82
TGFB1-204ENST00000600196 A0A1W2PPE3 182 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 M0QZK8 103 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 PGLYRP1O75594 196 aaPredicted RBP9.9□□□□□ -0.82
TGFB1-204ENST00000600196 IGHV3-7P01780 117 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 APOA2P02652 100 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 CT45A6P0DMU7 189 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 CT45A5P0DMU8 189 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 CT45A7P0DMV0 189 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 RPA2P15927 270 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 RAG2P55895 527 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 DLX1P56177 255 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 TAS2R31P59538 309 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 DCTN2Q13561 401 aaKnown RBP9.9□□□□□ -0.82
TGFB1-204ENST00000600196 DEFB112Q30KQ8 113 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 RUSC1-AS1Q66K80 236 aa9.9□□□□□ -0.82
TGFB1-204ENST00000600196 FAM53AQ6NSI3 398 aaPredicted RBP9.9□□□□□ -0.82
TGFB1-204ENST00000600196 PDZD9Q8IXQ8 264 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms