RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 SULT4A1Q9BR01 284 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 NICN1Q9BSH3 213 aa10.88□□□□□ -0.67
SCAF1-203ENST00000598359 RBMX2Q9Y388 322 aaKnown RBP10.88□□□□□ -0.67
SCAF1-203ENST00000598359 DNAH3Q8TD57 4116 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 SERPINE3A8MV23 424 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 BOLA2-SMG1P6H3BVE0 249 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 CD33P20138 364 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 CHATP28329 748 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 HTR2CP28335 458 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 SLC6A1P30531 599 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 BTCP35070 178 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 PPP1CCP36873 323 aaKnown RBP10.87□□□□□ -0.67
SCAF1-203ENST00000598359 RANBP1P43487 201 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 DGCR2P98153 550 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 UNC119Q13432 240 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 KLF9Q13886 244 aaPredicted RBP10.87□□□□□ -0.67
SCAF1-203ENST00000598359 EBI3Q14213 229 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 ZNF57Q68EA5 555 aaPredicted RBP10.87□□□□□ -0.67
SCAF1-203ENST00000598359 IZUMO1Q8IYV9 350 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 Q8N6K4 173 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 C8orf31Q8N9H6 132 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 DEDD2Q8WXF8 326 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 PHF21AQ96BD5 680 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 FAM3DQ96BQ1 224 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 MARVELD1Q9BSK0 173 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 FAAP24Q9BTP7 215 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 CST11Q9H112 138 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 OR2S2Q9NQN1 319 aa10.87□□□□□ -0.67
SCAF1-203ENST00000598359 MBNL3Q9NUK0 354 aaKnown RBP10.87□□□□□ -0.67
SCAF1-203ENST00000598359 A0A0A6YYD4 124 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 A0A0A6YYH2 397 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 A6NJ64 397 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 FGF16O43320 207 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 XRCC3O43542 346 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 PF4P02776 101 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 GLAP06280 429 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 RAB6AP20340 208 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 IL3RAP26951 378 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 TAS2R20P59543 309 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 RPS27AP62979 156 aaKnown RBP10.86□□□□□ -0.67
SCAF1-203ENST00000598359 PLET1Q6UQ28 207 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 Q6ZPA2 131 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 SLC35E3Q7Z769 313 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 TGIF2LXQ8IUE1 241 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 OR51D1Q8NGF3 324 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 OR2T10Q8NGZ9 312 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 TMEM59Q9BXS4 323 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 KCNIP1Q9NZI2 227 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 GHRLQ9UBU3 117 aa10.86□□□□□ -0.67
SCAF1-203ENST00000598359 TMEM272A0A1B0GTI8 110 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 LINC00854A0A1B0GVQ3 168 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 FAM240BA0A1B0GVZ2 78 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 CA11O75493 328 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 IGHG2P01859 326 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 CD3GP09693 182 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 UBBP0CG47 229 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 HLA-DMAP28067 261 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 CD1BP29016 333 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 F2RL1P55085 397 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 QRFPP83859 136 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 C2orf76Q3KRA6 126 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 MORN2Q502X0 79 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 TMEM69Q5SWH9 247 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 TRAT1Q6PIZ9 186 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 LCNL1Q6ZST4 164 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 AKAP14Q86UN6 197 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 TOMM5Q8N4H5 51 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 Q8N9W7 124 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 AUNIPQ9H7T9 357 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 PLSCR3Q9NRY6 295 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 COPZ2Q9P299 210 aa10.85□□□□□ -0.67
SCAF1-203ENST00000598359 A0A0B4J293 547 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 NAP1L6A6NFF2 107 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 CENPXA8MT69 81 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 TMEM14DPA8MWL7 114 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 MOSP00540 346 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 BLVRBP30043 206 aaPredicted RBP10.84□□□□□ -0.67
SCAF1-203ENST00000598359 GPR12P47775 334 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 OR3A3P47888 321 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 ZNF137PP52743 207 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 AP3S2P59780 193 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 SSBP1Q04837 148 aaKnown RBP10.84□□□□□ -0.67
SCAF1-203ENST00000598359 PLA2G7Q13093 441 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 Q3ZCU0 254 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 ETV3LQ6ZN32 361 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 ODF3L1Q8IXM7 274 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 STPG2Q8N412 459 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 WFDC9Q8NEX5 89 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 KCNG3Q8TAE7 436 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 IL1F10Q8WWZ1 152 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 S1PR3Q99500 378 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 HSPB9Q9BQS6 159 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 HDHD3Q9BSH5 251 aaPredicted RBP10.84□□□□□ -0.67
SCAF1-203ENST00000598359 ABHD14AQ9BUJ0 271 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 MRPL20Q9BYC9 149 aaKnown RBP10.84□□□□□ -0.67
SCAF1-203ENST00000598359 CHMP1AQ9HD42 196 aaPredicted RBP10.84□□□□□ -0.67
SCAF1-203ENST00000598359 RAB9BQ9NP90 201 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 DIABLOQ9NR28 239 aa10.84□□□□□ -0.67
SCAF1-203ENST00000598359 AURKAIP1Q9NWT8 199 aaPredicted RBP10.84□□□□□ -0.67
SCAF1-203ENST00000598359 ANKRD20A5PA0PJZ0 165 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms