RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 HSD17B10Q99714 261 aaKnown RBP17.02■□□□□ 0.32
PNKP-203ENST00000593946 PDCD10Q9BUL8 212 aa17.02■□□□□ 0.32
PNKP-203ENST00000593946 A8MXK9 166 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 RAB29O14966 203 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 GZMKP49863 264 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 NKX2-5P52952 324 aaPredicted RBP17.01■□□□□ 0.31
PNKP-203ENST00000593946 RPL30P62888 115 aaKnown RBP17.01■□□□□ 0.31
PNKP-203ENST00000593946 CATR1Q13166 79 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 Q5BKY6 102 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 TMEM268Q5VZI3 342 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 GGNBP1Q5YKI7 109 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 LYZL2Q7Z4W2 148 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 SLC35G3Q8N808 338 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 ZNF596Q8TC21 504 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 IL22RA2Q969J5 263 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 SEC22AQ96IW7 307 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 RANBP3Q9H6Z4 567 aaPredicted RBP17.01■□□□□ 0.31
PNKP-203ENST00000593946 ABCA2Q9BZC7 2435 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 SAA2-SAA4A0A096LPE2 208 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 C13orf42A0A1B0GVH6 325 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 SAA2P0DJI9 122 aaPredicted RBP17.01■□□□□ 0.31
PNKP-203ENST00000593946 ZFP36P26651 326 aaKnown RBP17.01■□□□□ 0.31
PNKP-203ENST00000593946 RPL39P5Q59GN2 51 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 C1orf229Q6ZS94 237 aaPredicted RBP17.01■□□□□ 0.31
PNKP-203ENST00000593946 ZNF695Q8IW36 515 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 SELENOHQ8IZQ5 122 aaKnown RBP17.01■□□□□ 0.31
PNKP-203ENST00000593946 RBPMSQ93062 196 aaKnown RBP17.01■□□□□ 0.31
PNKP-203ENST00000593946 OR10C1Q96KK4 312 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 ZNF251Q9BRH9 671 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 TMEM133Q9H2Q1 129 aa17.01■□□□□ 0.31
PNKP-203ENST00000593946 CSMD2Q7Z408 3487 aa17■□□□□ 0.31
PNKP-203ENST00000593946 DUXBA0A1W2PPF3 345 aa17■□□□□ 0.31
PNKP-203ENST00000593946 LINC00473A8K010 186 aa17■□□□□ 0.31
PNKP-203ENST00000593946 IFNA21P01568 189 aa17■□□□□ 0.31
PNKP-203ENST00000593946 SERPINE2P07093 398 aa17■□□□□ 0.31
PNKP-203ENST00000593946 ZNF16P17020 682 aaPredicted RBP17■□□□□ 0.31
PNKP-203ENST00000593946 DNASE1P24855 282 aa17■□□□□ 0.31
PNKP-203ENST00000593946 DUTP33316 252 aaKnown RBP17■□□□□ 0.31
PNKP-203ENST00000593946 ZNF585BQ52M93 769 aa17■□□□□ 0.31
PNKP-203ENST00000593946 LYG1Q8N1E2 194 aa17■□□□□ 0.31
PNKP-203ENST00000593946 LINC00311Q8N616 119 aa17■□□□□ 0.31
PNKP-203ENST00000593946 TCTEX1D1Q8N7M0 179 aa17■□□□□ 0.31
PNKP-203ENST00000593946 NMES1Q9C002 83 aa17■□□□□ 0.31
PNKP-203ENST00000593946 FAM212BQ9NTI7 297 aaPredicted RBP17■□□□□ 0.31
PNKP-203ENST00000593946 TMED3Q9Y3Q3 217 aa17■□□□□ 0.31
PNKP-203ENST00000593946 hCG_1809904A0A1W2PP81 198 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 A0A1W2PPE2 198 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 A0A1W2PR64 198 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 A0A1W2PRV1 198 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 CYCSP99999 105 aaKnown RBP16.99■□□□□ 0.31
PNKP-203ENST00000593946 OR11H4Q8NGC9 324 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 TCTEX1D2Q8WW35 142 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 ZNRD1Q9P1U0 126 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 ONECUT1Q9UBC0 465 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 MAP1AP78559 2803 aaPredicted RBP16.99■□□□□ 0.31
PNKP-203ENST00000593946 PIGBOS1A0A0B4J2F0 54 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 J3QR06 171 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 M0R1W7 72 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 M0R1X1 148 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 DSCR9P59020 149 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 BRWD1-AS2P59051 145 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 LINC00205P59089 165 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 PAX2Q02962 417 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 Q8N7P7 452 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 C2orf50Q96LR7 162 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 HYLS1Q96M11 299 aa16.99■□□□□ 0.31
PNKP-203ENST00000593946 IGHV4-30-2A0A087WSY4 118 aa16.98■□□□□ 0.31
PNKP-203ENST00000593946 IGKV1-39P01597 117 aa16.98■□□□□ 0.31
PNKP-203ENST00000593946 IGKV1D-39P04432 117 aa16.98■□□□□ 0.31
PNKP-203ENST00000593946 ABHD12Q8N2K0 398 aa16.98■□□□□ 0.31
PNKP-203ENST00000593946 OR9G1Q8NH87 305 aa16.98■□□□□ 0.31
PNKP-203ENST00000593946 VPS13CQ709C8 3753 aa16.97■□□□□ 0.31
PNKP-203ENST00000593946 ENSAO43768 121 aaKnown RBP16.97■□□□□ 0.31
PNKP-203ENST00000593946 RAMP3O60896 148 aa16.97■□□□□ 0.31
PNKP-203ENST00000593946 RPA2P15927 270 aa16.97■□□□□ 0.31
PNKP-203ENST00000593946 IL15RAQ13261 267 aa16.97■□□□□ 0.31
PNKP-203ENST00000593946 IAH1Q2TAA2 248 aaPredicted RBP16.97■□□□□ 0.31
PNKP-203ENST00000593946 NCR3LG1Q68D85 454 aa16.97■□□□□ 0.31
PNKP-203ENST00000593946 KIR3DL3Q8N743 410 aa16.97■□□□□ 0.31
PNKP-203ENST00000593946 PPP1R1CQ8WVI7 109 aa16.97■□□□□ 0.31
PNKP-203ENST00000593946 NAV2Q8IVL1 2488 aa16.97■□□□□ 0.31
PNKP-203ENST00000593946 IGHV2-26A0A0B4J1V2 119 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 IGHV4-61A0A0C4DH41 118 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 VDAC1P21796 283 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 ARF6P62330 175 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 LCN2P80188 198 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 NMSQ5H8A3 153 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 OR2B11Q5JQS5 317 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 ZNF833PQ6ZTB9 187 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 SPAG16Q8N0X2 631 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 TNFRSF14Q92956 283 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 S1PR3Q99500 378 aa16.96■□□□□ 0.31
PNKP-203ENST00000593946 TRAV14DV4A0A0A6YYC5 116 aa16.96■□□□□ 0.3
PNKP-203ENST00000593946 ZNF137PP52743 207 aa16.96■□□□□ 0.3
PNKP-203ENST00000593946 DLX1P56177 255 aa16.96■□□□□ 0.3
PNKP-203ENST00000593946 FGL1Q08830 312 aa16.96■□□□□ 0.3
PNKP-203ENST00000593946 HIST2H2BCQ6DN03 193 aa16.96■□□□□ 0.3
PNKP-203ENST00000593946 C1orf122Q6ZSJ8 110 aa16.96■□□□□ 0.3
PNKP-203ENST00000593946 OR10X1Q8NGY0 326 aa16.96■□□□□ 0.3
PNKP-203ENST00000593946 DDB2Q92466 427 aa16.96■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms