RNA–Protein interactions for RNA: ENST00000592444.5

ERCC1-216, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 449 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-216ENST00000592444 OR10Z1Q8NGY1 313 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 CHPT1Q8WUD6 406 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 S100ZQ8WXG8 99 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 AP3S1Q92572 193 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 BORCS5Q969J3 196 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 RFT1Q96AA3 541 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 FOXRED1Q96CU9 486 aaPredicted RBP3.72□□□□□ -1.81
ERCC1-216ENST00000592444 SEH1LQ96EE3 360 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 PAPOLGQ9BWT3 736 aaKnown RBP3.72□□□□□ -1.81
ERCC1-216ENST00000592444 WDR12Q9GZL7 423 aaKnown RBP3.72□□□□□ -1.81
ERCC1-216ENST00000592444 C6orf62Q9GZU0 229 aaPredicted RBP3.72□□□□□ -1.81
ERCC1-216ENST00000592444 GHITMQ9H3K2 345 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 RHOFQ9HBH0 211 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 HMG20AQ9NP66 347 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 RBFOX1Q9NWB1 397 aaKnown RBP3.72□□□□□ -1.81
ERCC1-216ENST00000592444 COMMD3Q9UBI1 195 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 MTFP1Q9UDX5 166 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 LINC00527Q9UJ94 153 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 HSF4Q9ULV5 492 aa3.72□□□□□ -1.81
ERCC1-216ENST00000592444 IGKV1D-17A0A075B6S4 117 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 ANKRD20A5PA0PJZ0 165 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 TMEM235A6NFC5 223 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 ZNF732B4DXR9 585 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 F5H5P2 479 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 GABARAPH6UMI1 98 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 NDUFA2O43678 99 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 AMY1AP04745 511 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 AMY2AP04746 511 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 CSN2P05814 226 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 OR8U8P0C7N1 319 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 CGB3P0DN86 165 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 CGB7P0DN87 165 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 BCL3P20749 454 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 SOX6P35712 828 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 GNALP38405 381 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 MECP2P51608 486 aaKnown RBP3.71□□□□□ -1.82
ERCC1-216ENST00000592444 CAPZA1P52907 286 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 SLC35B1P78383 322 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 MALLQ13021 153 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 ZNF846Q147U1 533 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 PRAMEF6Q5VXH4 476 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 TEX36Q5VZQ5 186 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 STUMQ69YW2 141 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 AWAT2Q6E213 333 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 PYHIN1Q6K0P9 492 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 UNQ6126/PRO20091Q6UXV3 157 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 ZNF826PQ6ZT77 177 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 SLC25A26Q70HW3 274 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 IZUMO1Q8IYV9 350 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 JAGN1Q8N5M9 183 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 OR5L1Q8NGL2 311 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 OR11L1Q8NGX0 322 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 OR10K1Q8NGX5 313 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 OR52I2Q8NH67 350 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 ANGPTL6Q8NI99 470 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 KCNG3Q8TAE7 436 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 TNFAIP8L1Q8WVP5 186 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 CAPSLQ8WWF8 208 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 H1FXQ92522 213 aaKnown RBP3.71□□□□□ -1.82
ERCC1-216ENST00000592444 PIGCQ92535 297 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 EMG1Q92979 244 aaKnown RBP3.71□□□□□ -1.82
ERCC1-216ENST00000592444 MRPS24Q96EL2 167 aaKnown RBP3.71□□□□□ -1.82
ERCC1-216ENST00000592444 COQ2Q96H96 371 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 ZNF488Q96MN9 340 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 SULT4A1Q9BR01 284 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 TMEM59Q9BXS4 323 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 SLC22A4Q9H015 551 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 WDR13Q9H1Z4 485 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 PLEKHA3Q9HB20 300 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 ING3Q9NXR8 418 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 EXTL2Q9UBQ6 330 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 CKLFQ9UBR5 152 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 ZNF107Q9UII5 783 aaPredicted RBP3.71□□□□□ -1.82
ERCC1-216ENST00000592444 RAB22AQ9UL26 194 aa3.71□□□□□ -1.82
ERCC1-216ENST00000592444 NOP16Q9Y3C1 178 aaKnown RBP3.71□□□□□ -1.82
ERCC1-216ENST00000592444 TRAV38-1A0A0B4J264 116 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 IGKV1-6A0A0C4DH72 117 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 A0A1B0GVG6 124 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 H3BUI4 141 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 SULT1C2O00338 296 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 SLC33A1O00400 549 aaPredicted RBP3.7□□□□□ -1.82
ERCC1-216ENST00000592444 GEMIN2O14893 280 aaKnown RBP3.7□□□□□ -1.82
ERCC1-216ENST00000592444 ORC5O43913 435 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 PDCD6O75340 191 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 COX7A1P24310 79 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 HAAOP46952 286 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 OR3A1P47881 315 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 DYNLT3P51808 116 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 MTCP1P56278 107 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 NANOS2P60321 138 aaKnown RBP3.7□□□□□ -1.82
ERCC1-216ENST00000592444 MRPS10P82664 201 aaKnown RBP3.7□□□□□ -1.82
ERCC1-216ENST00000592444 SSBP1Q04837 148 aaKnown RBP3.7□□□□□ -1.82
ERCC1-216ENST00000592444 MPV17LQ2QL34 196 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 SLC22A6Q4U2R8 563 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 ATPAF1Q5TC12 328 aaPredicted RBP3.7□□□□□ -1.82
ERCC1-216ENST00000592444 RAB12Q6IQ22 244 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 MZT2AQ6P582 158 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 HAGHLQ6PII5 290 aaPredicted RBP3.7□□□□□ -1.82
ERCC1-216ENST00000592444 Q6ZNX1 250 aa3.7□□□□□ -1.82
ERCC1-216ENST00000592444 LINC00596Q86U02 117 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms