RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 CT45A6P0DMU7 189 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 CT45A5P0DMU8 189 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 CT45A7P0DMV0 189 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 PF4V1P10720 104 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 NCS1P62166 190 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 SRSF7Q16629 238 aaKnown RBP eCLIP11.71□□□□□ -0.53
ATG4D-207ENST00000587256 PNLIPRP3Q17RR3 467 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 ZNF260Q3ZCT1 412 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 TCTEX1D4Q5JR98 221 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 Q6ZS49 121 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 ZNF329Q86UD4 541 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 STPG2Q8N412 459 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 DRAXINQ8NBI3 349 aaPredicted RBP11.71□□□□□ -0.53
ATG4D-207ENST00000587256 OR13F1Q8NGS4 319 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 OR8U1Q8NH10 309 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 HSPB9Q9BQS6 159 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 ZNF107Q9UII5 783 aaPredicted RBP11.71□□□□□ -0.53
ATG4D-207ENST00000587256 SPATA2Q9UM82 520 aa11.71□□□□□ -0.53
ATG4D-207ENST00000587256 TSSC4Q9Y5U2 329 aaPredicted RBP11.71□□□□□ -0.53
ATG4D-207ENST00000587256 A0A0A6YYH2 397 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 A6NJ64 397 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 LINC01548A6NM66 108 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 ADARB2-AS1A8MUL3 147 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 H0YJW9 148 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 APOA2P02652 100 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 TFAP2AP05549 437 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 CNTFRP26992 372 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 MC5RP33032 325 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 RPS19P39019 145 aaKnown RBP11.7□□□□□ -0.54
ATG4D-207ENST00000587256 PLGLAQ15195 96 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.7□□□□□ -0.54
ATG4D-207ENST00000587256 GON7Q9BXV9 100 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 TOLLIPQ9H0E2 274 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 DCSTAMPQ9H295 470 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 DIABLOQ9NR28 239 aa11.7□□□□□ -0.54
ATG4D-207ENST00000587256 MEGF8Q7Z7M0 2845 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 SSX5O60225 188 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 RBBP9O75884 186 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 VDAC1P21796 283 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 VBP1P61758 197 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 C5orf64Q2M2E5 130 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 UBE2NLQ5JXB2 153 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 H1FOOQ8IZA3 346 aaPredicted RBP11.69□□□□□ -0.54
ATG4D-207ENST00000587256 SAMD12Q8N8I0 201 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 OR5AN1Q8NGI8 311 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 RITA1Q96K30 269 aa11.69□□□□□ -0.54
ATG4D-207ENST00000587256 MRPS26Q9BYN8 205 aaKnown RBP11.69□□□□□ -0.54
ATG4D-207ENST00000587256 HLA-DRB1P01911 266 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 PF4P02776 101 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 CTXN2P0C2S0 81 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 ARPC4P59998 168 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 COMMD1Q8N668 190 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 ZNF383Q8NA42 475 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 NPBQ8NG41 125 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 SLC25A46Q96AG3 418 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 PARP11Q9NR21 331 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 SDHAF2Q9NX18 166 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 ANXA10Q9UJ72 324 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 NOTCH1P46531 2555 aa11.68□□□□□ -0.54
ATG4D-207ENST00000587256 NUDT19A8MXV4 375 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 PROP1O75360 226 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 NDUFA3O95167 84 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 CBX3Q13185 183 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 TMEM69Q5SWH9 247 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 LIN54Q6MZP7 749 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 CNIH2Q6PI25 160 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 PDPNQ86YL7 162 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 KCTD12Q96CX2 325 aaKnown RBP11.67□□□□□ -0.54
ATG4D-207ENST00000587256 S100A16Q96FQ6 103 aaKnown RBP11.67□□□□□ -0.54
ATG4D-207ENST00000587256 FBXL15Q9H469 300 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 AUNIPQ9H7T9 357 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 SLC35D1Q9NTN3 355 aa11.67□□□□□ -0.54
ATG4D-207ENST00000587256 J3QRK9 145 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 RRHO14718 337 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 ATP6V0E1O15342 81 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 GABARAPO95166 117 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 IGKV1-16P04430 117 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 OR5H8P0DN80 308 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 NFYAP23511 347 aaPredicted RBP11.66□□□□□ -0.54
ATG4D-207ENST00000587256 LINC00205P59089 165 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 RPS16P62249 146 aaKnown RBP11.66□□□□□ -0.54
ATG4D-207ENST00000587256 RPL23AP62750 156 aaKnown RBP11.66□□□□□ -0.54
ATG4D-207ENST00000587256 CXorf66Q5JRM2 361 aaPredicted RBP11.66□□□□□ -0.54
ATG4D-207ENST00000587256 TEX38Q6PEX7 206 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 C1QL4Q86Z23 238 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 BEST4Q8NFU0 473 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 ABHD5Q8WTS1 349 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 TSNAXQ99598 290 aaKnown RBP11.66□□□□□ -0.54
ATG4D-207ENST00000587256 OR51J1Q9H342 316 aa11.66□□□□□ -0.54
ATG4D-207ENST00000587256 IGHV7-81A0A0B4J1V7 117 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 XRCC3O43542 346 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 SPDEFO95238 335 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 IGF1P05019 195 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 FCER2P06734 321 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 PTHLHP12272 177 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 CBX5P45973 191 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 THBS3P49746 956 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 LUMP51884 338 aaPredicted RBP11.65□□□□□ -0.54
ATG4D-207ENST00000587256 RTL8BQ17RB0 113 aa11.65□□□□□ -0.54
ATG4D-207ENST00000587256 GPR107Q5VW38 600 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms