RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 BEST4Q8NFU0 473 aa16.41■□□□□ 0.22
PPP4R1-221ENST00000582240 ACOT12Q8WYK0 555 aa16.41■□□□□ 0.22
PPP4R1-221ENST00000582240 LINC00527Q9UJ94 153 aa16.41■□□□□ 0.22
PPP4R1-221ENST00000582240 FAM25AB3EWG3 89 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 FAM25CB3EWG5 89 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 FAM25GB3EWG6 89 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 M0QZK8 103 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 M0R1X1 148 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 HLA-DQB1P01920 261 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 ACTBP60709 375 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 ZNF383Q8NA42 475 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 WNT10AQ9GZT5 417 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 SDHAF2Q9NX18 166 aa16.4■□□□□ 0.22
PPP4R1-221ENST00000582240 H0YJW9 148 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 FGF16O43320 207 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 APOA1P02647 267 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 TMBIM6P55061 237 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 FAM71F2Q6NXP2 309 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 MZT2AQ6P582 158 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 SNX29P2Q8IUI4 249 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 RAB2BQ8WUD1 216 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 SNAPC3Q92966 411 aa16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 NOL4LQ96MY1 436 aaPredicted RBP16.39■□□□□ 0.21
PPP4R1-221ENST00000582240 H7C2Y5 167 aa16.38■□□□□ 0.21
PPP4R1-221ENST00000582240 ARPC4P59998 168 aa16.38■□□□□ 0.21
PPP4R1-221ENST00000582240 MMDQ15546 238 aa16.38■□□□□ 0.21
PPP4R1-221ENST00000582240 RNASE12Q5GAN4 147 aaKnown RBP16.38■□□□□ 0.21
PPP4R1-221ENST00000582240 CENPVQ7Z7K6 275 aaPredicted RBP16.38■□□□□ 0.21
PPP4R1-221ENST00000582240 RASL11BQ9BPW5 248 aa16.38■□□□□ 0.21
PPP4R1-221ENST00000582240 CEPT1Q9Y6K0 416 aa16.38■□□□□ 0.21
PPP4R1-221ENST00000582240 IGKV1D-13A0A0B4J2D9 117 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 SMIM31A0A1B0GVY4 71 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 CTDSP2O14595 271 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 DIRAS3O95661 229 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 CTXN2P0C2S0 81 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 IGKV1-13P0DP09 117 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 PRSS3P35030 304 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 OR5AU1Q8NGC0 362 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 SGMS2Q8NHU3 365 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 WIPF2Q8TF74 440 aaPredicted RBP16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 AP3S1Q92572 193 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 ISOC1Q96CN7 298 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 CMTM3Q96MX0 182 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 HSPB9Q9BQS6 159 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 RBM38Q9H0Z9 239 aaKnown RBP16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 MIXL1Q9H2W2 232 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 GHITMQ9H3K2 345 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 IFT46Q9NQC8 304 aa16.37■□□□□ 0.21
PPP4R1-221ENST00000582240 H3BMQ9 156 aa16.36■□□□□ 0.21
PPP4R1-221ENST00000582240 CBX5P45973 191 aa16.36■□□□□ 0.21
PPP4R1-221ENST00000582240 SLC35E3Q7Z769 313 aa16.36■□□□□ 0.21
PPP4R1-221ENST00000582240 OR5AN1Q8NGI8 311 aa16.36■□□□□ 0.21
PPP4R1-221ENST00000582240 DYNC2LI1Q8TCX1 351 aa16.36■□□□□ 0.21
PPP4R1-221ENST00000582240 WASHC3Q9Y3C0 194 aa16.36■□□□□ 0.21
PPP4R1-221ENST00000582240 OR2W1Q9Y3N9 320 aa16.36■□□□□ 0.21
PPP4R1-221ENST00000582240 OR5H14A6NHG9 310 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 NOL3O60936 208 aaKnown RBP16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 FBXO24O75426 580 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 AADACP22760 399 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 FCGR2CP31995 323 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 SOX6P35712 828 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 LUMP51884 338 aaPredicted RBP16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 ZNF329Q86UD4 541 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 FAM71E2Q8N5Q1 922 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 ZNF436-AS1Q8NC38 126 aaPredicted RBP16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 CITED2Q99967 270 aaPredicted RBP16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 LIN7CQ9NUP9 197 aaKnown RBP16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 EXTL2Q9UBQ6 330 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 GAB2Q9UQC2 676 aa16.35■□□□□ 0.21
PPP4R1-221ENST00000582240 CCDC160A6NGH7 325 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 NBR2O15453 112 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 IGHG2P01859 326 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 PMP2P02689 132 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 MC5RP33032 325 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 NSUN5P1Q3KNT7 163 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 BVESQ8NE79 360 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 OR8H1Q8NGG4 311 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 BCL7BQ9BQE9 202 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 FBXL15Q9H469 300 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 SLC35D1Q9NTN3 355 aa16.34■□□□□ 0.21
PPP4R1-221ENST00000582240 RGS5O15539 181 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 TUSC2O75896 110 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 TSPAN15O95858 294 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 IGKV1-16P04430 117 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 OR5H8P0DN80 308 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 RFX2P48378 723 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 RPS16P62249 146 aaKnown RBP16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 CDK10Q15131 360 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 TCTEX1D4Q5JR98 221 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 LAX1Q8IWV1 398 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 NPBQ8NG41 125 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 OR5AP2Q8NGF4 316 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 GPX8Q8TED1 209 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 CLCC1Q96S66 551 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 GPHA2Q96T91 129 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 NECAP2Q9NVZ3 263 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 ANAPC10Q9UM13 185 aa16.33■□□□□ 0.2
PPP4R1-221ENST00000582240 A0A1W2PRX2 142 aa16.32■□□□□ 0.2
PPP4R1-221ENST00000582240 LINC00473A8K010 186 aa16.32■□□□□ 0.2
PPP4R1-221ENST00000582240 FCN1O00602 326 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms