RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 FAM90A26D6RGX4 464 aa15.06■□□□□ 0
SMPD3-211ENST00000568373 ATG12O94817 140 aa15.06■□□□□ 0
SMPD3-211ENST00000568373 P0C879 139 aa15.06■□□□□ 0
SMPD3-211ENST00000568373 LOXL3P58215 753 aa15.06■□□□□ 0
SMPD3-211ENST00000568373 STRAPQ9Y3F4 350 aaKnown RBP15.06■□□□□ 0
SMPD3-211ENST00000568373 DSCAML1Q8TD84 2053 aa15.06■□□□□ 0
SMPD3-211ENST00000568373 LINC00473A8K010 186 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 C17orf100A8MU93 164 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 S1PR2O95136 353 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 KRASP01116 189 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 CD55P08174 381 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 IRF2P14316 349 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 ATP6V0CP27449 155 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 G6PCP35575 357 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 SULT1A1P50225 295 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 DEFA5Q01523 94 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 ADAM5Q6NVV9 412 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.05■□□□□ 0
SMPD3-211ENST00000568373 LRRC46Q96FV0 321 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 WFIKKN1Q96NZ8 548 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 TMEM231Q9H6L2 316 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 TREM1Q9NP99 234 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 CALYQ9NYX4 217 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 POLEQ07864 2286 aa15.05■□□□□ 0
SMPD3-211ENST00000568373 TPRP12270 2363 aaKnown RBP15.05■□□□□ -0
SMPD3-211ENST00000568373 CGB3P0DN86 165 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 CGB7P0DN87 165 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 MUC1P15941 1255 aaPredicted RBP15.05■□□□□ -0
SMPD3-211ENST00000568373 ADCYAP1P18509 176 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 TNFRSF1AP19438 455 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 CAMLGP49069 296 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 CCL8P80075 99 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 BTN1A1Q13410 526 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 DUX4L9Q6RFH8 374 aaPredicted RBP15.05■□□□□ -0
SMPD3-211ENST00000568373 DEFB108BQ8NET1 73 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 GAFA1Q96PS6 74 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 ATP5SQ99766 215 aa15.05■□□□□ -0
SMPD3-211ENST00000568373 RAI1Q7Z5J4 1906 aaPredicted RBP15.05■□□□□ -0
SMPD3-211ENST00000568373 TRGV8A0A0C4DH27 118 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 PRH1P02810 166 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 IAPPP10997 89 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 GPR12P47775 334 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 FHITP49789 147 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 ARHGDIBP52566 201 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 TAS2R30P59541 319 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 ZNF616Q08AN1 781 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 TEX36Q5VZQ5 186 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 ATRAIDQ6UW56 229 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 TMEM182Q6ZP80 229 aaPredicted RBP15.04■□□□□ -0
SMPD3-211ENST00000568373 TGIF2LYQ8IUE0 185 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 TSNAXQ99598 290 aaKnown RBP15.04■□□□□ -0
SMPD3-211ENST00000568373 ZNF665Q9H7R5 613 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 NGBQ9NPG2 151 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 KCNJ16Q9NPI9 418 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 UQCC1Q9NVA1 299 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 PSENENQ9NZ42 101 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 LAMP3Q9UQV4 416 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 FAM96BQ9Y3D0 163 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 TRIM77I1YAP6 450 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 AGPAT2O15120 278 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 ATXN7O15265 892 aaPredicted RBP15.04■□□□□ -0
SMPD3-211ENST00000568373 C1QL1O75973 258 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 CLDN14O95500 239 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 TMEM267Q0VDI3 215 aaPredicted RBP15.04■□□□□ -0
SMPD3-211ENST00000568373 MIDNQ504T8 468 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 ZNF788Q6ZQV5 615 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 PLPPR2Q96GM1 343 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 FAM234AQ9H0X4 552 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 RAB9BQ9NP90 201 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 C19orf12Q9NSK7 152 aa15.04■□□□□ -0
SMPD3-211ENST00000568373 TANC2Q9HCD6 1990 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 DFFBO76075 338 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 TSPAN15O95858 294 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 GYPAP02724 150 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 LINC00205P59089 165 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 TNFRSF9Q07011 255 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 C17orf58Q2M2W7 97 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 C10orf91Q5T1B1 145 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 OR2G3Q8NGZ4 309 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 GNPNAT1Q96EK6 184 aaPredicted RBP15.03■□□□□ -0
SMPD3-211ENST00000568373 CCL13Q99616 98 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 DCAF16Q9NXF7 216 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 HSPB7Q9UBY9 170 aa15.03■□□□□ -0
SMPD3-211ENST00000568373 SMG1Q96Q15 3661 aaKnown RBP15.03■□□□□ -0
SMPD3-211ENST00000568373 PROP1O75360 226 aa15.02■□□□□ -0
SMPD3-211ENST00000568373 CD5P06127 495 aa15.02■□□□□ -0
SMPD3-211ENST00000568373 DUTP33316 252 aaKnown RBP15.02■□□□□ -0
SMPD3-211ENST00000568373 CASP6P55212 293 aa15.02■□□□□ -0
SMPD3-211ENST00000568373 UBE2KP61086 200 aa15.02■□□□□ -0
SMPD3-211ENST00000568373 UNQ6494/PRO21346Q6UXR6 183 aa15.02■□□□□ -0
SMPD3-211ENST00000568373 CD300LFQ8TDQ1 290 aa15.02■□□□□ -0
SMPD3-211ENST00000568373 TRGV10A0A0A0MS01 117 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 KBTBD11-OT1A0A1B0GTJ5 212 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 LRRC30A6NM36 301 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 VSTM5A8MXK1 200 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 UMAD1C9J7I0 102 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 F8W036 122 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 RNASEK-C17orf49H0YIS7 233 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 TLE1Q04724 770 aa15.02□□□□□ -0.01
SMPD3-211ENST00000568373 NCR3LG1Q68D85 454 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms