RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, human

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC28-222	ENST00000561431	FGGY	Q96C11	551 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	CMTM7	Q96FZ5	175 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	TMEM80	Q96HE8	168 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	MS4A4E	Q96PG1	132 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	SIGLEC12	Q96PQ1	595 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	RASL11B	Q9BPW5	248 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	PDCD1LG2	Q9BQ51	273 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	MRPL57	Q9BQC6	102 aa	Known RBP	3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	GINS3	Q9BRX5	216 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	MED18	Q9BUE0	208 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	MND1	Q9BWT6	205 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	HES7	Q9BYE0	225 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR11A1	Q9GZK7	315 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	YIPF3	Q9GZM5	350 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	PARL	Q9H300	379 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	HEXA-AS1	Q9H8Q6	139 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	JPT2	Q9H910	190 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	FAM206A	Q9NX38	181 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	TMEM216	Q9P0N5	145 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	COPS3	Q9UNS2	423 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	TRAPPC4	Q9Y296	219 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	DOPEY1	Q5JWR5	2465 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	COL12A1	Q99715	3063 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	MAST4	O15021	2626 aa		3.2	□□□□□ -1.9
LRRC28-222	ENST00000561431	CENPE	Q02224	2701 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	TRAV17	A0A0B4J275	112 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431		A0A1B0GW55	424 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	SLC17A3	O00476	420 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	UBFD1	O14562	309 aa	Known RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF354A	O60765	605 aa	Predicted RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	ATG12	O94817	140 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	AIFM1	O95831	613 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	CLPS	P04118	112 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	IGKV3-11	P04433	115 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	HOXD4	P09016	255 aa	Predicted RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DUX4L2	P0CJ85	424 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DUX4L3	P0CJ86	424 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DUX4L4	P0CJ87	422 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DUX4L5	P0CJ88	424 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DUX4L6	P0CJ89	424 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DUX4L7	P0CJ90	424 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	RAB5A	P20339	215 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	GRPR	P30550	384 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	PYCR1	P32322	319 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	SAA4	P35542	130 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	SSR2	P43308	183 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	RPS20	P60866	119 aa	Known RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	NAA20	P61599	178 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	HIST1H3A	P68431	136 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	H3F3A	P84243	136 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	EIF2B1	Q14232	305 aa	Known RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	SURF2	Q15527	256 aa	Predicted RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	CD226	Q15762	336 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	UNC50	Q53HI1	259 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF678	Q5SXM1	525 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DNLZ	Q5SXM8	178 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	SPINK14	Q6IE38	97 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	LPCAT3	Q6P1A2	487 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DUX4L9	Q6RFH8	374 aa	Predicted RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	C16orf47	Q6ZP98	133 aa	Predicted RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	HIST2H3A	Q71DI3	136 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	RPS19BP1	Q86WX3	136 aa	Known RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	C9orf40	Q8IXQ3	194 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	EIF4E3	Q8N5X7	224 aa	Known RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	SAMD12	Q8N8I0	201 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR8G5	Q8NG78	346 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR4K17	Q8NGC6	315 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR4C13	Q8NGP0	309 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR13G1	Q8NGZ3	307 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR5B3	Q8NH48	314 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR4X1	Q8NH49	305 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	GRPEL2	Q8TAA5	225 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	RASL10A	Q92737	203 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	RDH5	Q92781	318 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	RCHY1	Q96PM5	261 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	OR8B4	Q96RC9	309 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	ZNF382	Q96SR6	550 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	SIGMAR1	Q99720	223 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	CMSS1	Q9BQ75	279 aa	Known RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	TAPBPL	Q9BX59	468 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	ACTR6	Q9GZN1	396 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	GFRA4	Q9GZZ7	299 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	MS4A6A	Q9H2W1	248 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	LIME1	Q9H400	295 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	RPF2	Q9H7B2	306 aa	Known RBP	3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	REEP1	Q9H902	201 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431		Q9HAA7	133 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	PRTFDC1	Q9NRG1	225 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	COMMD9	Q9P000	198 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	THYN1	Q9P016	225 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DUX4	Q9UBX2	424 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	JPT1	Q9UK76	154 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	KLF12	Q9Y4X4	402 aa		3.19	□□□□□ -1.9
LRRC28-222	ENST00000561431	DOCK10	Q96BY6	2186 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	TGIF2-C20orf24	A0A0A6YYL0	155 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431		A0A0G2JMM0	328 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431		A0A1W2PPB8	328 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431		A0A1W2PRS3	328 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	DAPL1	A0PJW8	107 aa		3.18	□□□□□ -1.9
LRRC28-222	ENST00000561431	PINLYP	A6NC86	204 aa		3.18	□□□□□ -1.9

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