RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 H0YJW9 148 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 M0R1X1 148 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 CCL24O00175 119 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 RAB27BO00194 218 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 FABP7O15540 132 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 OR8U9P0C7N5 309 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 MYCNOSP40205 109 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 NDPQ00604 133 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 NEDD8Q15843 81 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 DEFB121Q5J5C9 76 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 LY6G6FQ5SQ64 297 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 COMMD1Q8N668 190 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 OR8U1Q8NH10 309 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 CHCHD6Q9BRQ6 235 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 AGMATQ9BSE5 352 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 FAM103A1Q9BTL3 118 aaKnown RBP9.79□□□□□ -0.84
SMAD3-208ENST00000558827 OR51J1Q9H342 316 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 DAPK2Q9UIK4 370 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 ZNF221Q9UK13 617 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 FBXO7Q9Y3I1 522 aa9.79□□□□□ -0.84
SMAD3-208ENST00000558827 TRAV41A0A0B4J266 112 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 LOC100506127A0A0U1RQW1 187 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 K7EIL1 84 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 FCGR3AP08637 254 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 GADD45AP24522 165 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 TALDO1P37837 337 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 RPS16P62249 146 aaKnown RBP9.78□□□□□ -0.84
SMAD3-208ENST00000558827 CFHR3Q02985 330 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 FOXE3Q13461 319 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 ZNF773Q6PK81 442 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 ZNF383Q8NA42 475 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 EDARADDQ8WWZ3 215 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 RCC1LQ96I51 464 aaKnown RBP9.78□□□□□ -0.84
SMAD3-208ENST00000558827 P2RX4Q99571 388 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 GON7Q9BXV9 100 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 GNB4Q9HAV0 340 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 STUB1Q9UNE7 303 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 SSR3Q9UNL2 185 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 WASHC3Q9Y3C0 194 aa9.78□□□□□ -0.84
SMAD3-208ENST00000558827 MFNGO00587 321 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 RRHO14718 337 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 IGHG4P01861 327 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 HLA-DRB1P01911 266 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 ELANEP08246 267 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 HIST1H1DP16402 221 aaKnown RBP9.77□□□□□ -0.85
SMAD3-208ENST00000558827 SDC2P34741 201 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 CX3CL1P78423 397 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 PSG5Q15238 335 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 CDNFQ49AH0 187 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 TMEM65Q6PI78 240 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 NPBQ8NG41 125 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 OR4A4PQ8NGN8 299 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 C5orf30Q96GV9 206 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 ST6GALNAC5Q9BVH7 336 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 ALX4Q9H161 411 aaPredicted RBP9.77□□□□□ -0.85
SMAD3-208ENST00000558827 OR2D2Q9H210 308 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 TPSG1Q9NRR2 321 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 METTL1Q9UBP6 276 aaKnown RBP9.77□□□□□ -0.85
SMAD3-208ENST00000558827 MGAT4AQ9UM21 535 aa9.77□□□□□ -0.85
SMAD3-208ENST00000558827 RBM7Q9Y580 266 aaKnown RBP9.77□□□□□ -0.85
SMAD3-208ENST00000558827 A0A1W2PN81 502 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 METTL21EPA6NDL7 271 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 NOTOA8MTQ0 251 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 MRPS14O60783 128 aaKnown RBP9.76□□□□□ -0.85
SMAD3-208ENST00000558827 NDUFA3O95167 84 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 IGKV1-16P04430 117 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 IGF1P05019 195 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 TFAP2AP05549 437 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 FCER2P06734 321 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 RAB6AP20340 208 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 PSMB8P28062 276 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 CHRNA7P36544 502 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 TGFBR1P36897 503 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 CDX1P47902 265 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-208ENST00000558827 LUMP51884 338 aaPredicted RBP9.76□□□□□ -0.85
SMAD3-208ENST00000558827 FAM71F2Q6NXP2 309 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 REC114Q7Z4M0 266 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 OR5AN1Q8NGI8 311 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 OR5H6Q8NGV6 325 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 OR10J5Q8NHC4 309 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 LGALS14Q8TCE9 139 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 NUDCD2Q8WVJ2 157 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 MS4A10Q96PG2 267 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 GINS4Q9BRT9 223 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 YTHDF1Q9BYJ9 559 aaKnown RBP9.76□□□□□ -0.85
SMAD3-208ENST00000558827 SLC35D1Q9NTN3 355 aa9.76□□□□□ -0.85
SMAD3-208ENST00000558827 OR5H14A6NHG9 310 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 ITGB1BP1O14713 200 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 SLC25A17O43808 307 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 SOX15O60248 233 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 EGR2P11161 476 aaPredicted RBP9.75□□□□□ -0.85
SMAD3-208ENST00000558827 CD36P16671 472 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 PPIFP30405 207 aaKnown RBP9.75□□□□□ -0.85
SMAD3-208ENST00000558827 MC5RP33032 325 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 GNB1P62873 340 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 PJVKQ0ZLH3 352 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 KIAA0141Q14154 515 aaPredicted RBP9.75□□□□□ -0.85
SMAD3-208ENST00000558827 KIR2DS1Q14954 304 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 IDNKQ5T6J7 187 aa9.75□□□□□ -0.85
SMAD3-208ENST00000558827 UNQ5815/PRO19632Q6UWF5 114 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms