RNA–Protein interactions for RNA: ENST00000549139.5

CHMP1A-206, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-206ENST00000549139 WIPF2Q8TF74 440 aaPredicted RBP12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 NUDCD2Q8WVJ2 157 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 ABHD14BQ96IU4 210 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 NABP2Q9BQ15 211 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 GAB2Q9UQC2 676 aa12.47□□□□□ -0.41
CHMP1A-206ENST00000549139 ZNF736B4DX44 427 aaPredicted RBP12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 BET1O15155 118 aa12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 VSIG10L2P0DP72 767 aa12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 C5orf56Q8N8D9 126 aa12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 WFDC9Q8NEX5 89 aa12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 OR8H1Q8NGG4 311 aa12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 R3HDM4Q96D70 268 aa12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 AUNIPQ9H7T9 357 aa12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 COMMD3Q9UBI1 195 aa12.46□□□□□ -0.41
CHMP1A-206ENST00000549139 DYNC2H1Q8NCM8 4307 aaKnown RBP12.46□□□□□ -0.42
CHMP1A-206ENST00000549139 EPPK1P58107 5090 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 PROP1O75360 226 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 CD28P10747 220 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 ZNF182P17025 639 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 RPL39P5Q59GN2 51 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 ARSJQ5FYB0 599 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 MZT2AQ6P582 158 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 CNIH2Q6PI25 160 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 NDUFA11Q86Y39 141 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 CLVS1Q8IUQ0 354 aaPredicted RBP12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 OR4F17Q8NGA8 305 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 WWC2-AS2Q96NR7 200 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 OR4F4Q96R69 305 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 BCL7BQ9BQE9 202 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 GINS4Q9BRT9 223 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 MRPL20Q9BYC9 149 aaKnown RBP12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 WNT10AQ9GZT5 417 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 PLSCR3Q9NRY6 295 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 ZNF221Q9UK13 617 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 RNF150Q9ULK6 438 aa12.45□□□□□ -0.42
CHMP1A-206ENST00000549139 RYR2Q92736 4967 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 FBXO24O75426 580 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 APOA1P02647 267 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 CT45A6P0DMU7 189 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 CT45A5P0DMU8 189 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 CT45A7P0DMV0 189 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 VDAC2P45880 294 aaPredicted RBP12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 CBX5P45973 191 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 TMBIM6P55061 237 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 H1FOOQ8IZA3 346 aaPredicted RBP12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 RAB2BQ8WUD1 216 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 AP3S1Q92572 193 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 ANXA10Q9UJ72 324 aa12.44□□□□□ -0.42
CHMP1A-206ENST00000549139 BIRC6Q9NR09 4857 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 NCBP2LA6PVI3 153 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 PEX14O75381 377 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 EIF4EP06730 217 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 OR8U9P0C7N5 309 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 IGLL1P15814 213 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 MC5RP33032 325 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 GPR12P47775 334 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 TMEM69Q5SWH9 247 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 HOGA1Q86XE5 327 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 Q8N9W7 124 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 BEST4Q8NFU0 473 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 OR8U1Q8NH10 309 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 CITED2Q99967 270 aaPredicted RBP12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 LIN7CQ9NUP9 197 aaKnown RBP12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 SCOCQ9UIL1 159 aa12.43□□□□□ -0.42
CHMP1A-206ENST00000549139 SMIM31A0A1B0GVY4 71 aa12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 OR5H14A6NHG9 310 aa12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 SH2D7A6NKC9 451 aaPredicted RBP12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 PTHLHP12272 177 aa12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 F2RL1P55085 397 aa12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 TAS2R20P59543 309 aa12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 C9orf152Q5JTZ5 239 aa12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 GVQW1Q8N7I0 195 aa12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 OR5AN1Q8NGI8 311 aa12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 RBM7Q9Y580 266 aaKnown RBP12.42□□□□□ -0.42
CHMP1A-206ENST00000549139 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 WI2-2373I1.2A0A1W2PRP0 233 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 H0YJW9 148 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 HPGDSO60760 199 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 IGHG2P01859 326 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 HLA-DQB1P01920 261 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 ELK1P19419 428 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 ACTBP60709 375 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 SPCS2Q15005 226 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 TMEM95Q3KNT9 176 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 FAM71E2Q8N5Q1 922 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 RBMXL1Q96E39 390 aaKnown RBP12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 RNF5Q99942 180 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 RASL11BQ9BPW5 248 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 OR2D2Q9H210 308 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 SDHAF2Q9NX18 166 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 OR2W1Q9Y3N9 320 aa12.41□□□□□ -0.42
CHMP1A-206ENST00000549139 SACSQ9NZJ4 4579 aa12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 PRSS3P35030 304 aa12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 SOX6P35712 828 aa12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 KRTAP10-11P60412 298 aa12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 FAM131AQ6UXB0 335 aa12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 GLDNQ6ZMI3 551 aaPredicted RBP12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 CENPVQ7Z7K6 275 aaPredicted RBP12.4□□□□□ -0.42
CHMP1A-206ENST00000549139 NPBQ8NG41 125 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms