RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 HDHD3Q9BSH5 251 aaPredicted RBP7.31□□□□□ -1.24
YBX3-218ENST00000546298 CENPOQ9BU64 300 aa7.31□□□□□ -1.24
YBX3-218ENST00000546298 PECRQ9BY49 303 aa7.31□□□□□ -1.24
YBX3-218ENST00000546298 FBXL15Q9H469 300 aa7.31□□□□□ -1.24
YBX3-218ENST00000546298 TRAV1-2A0A0B4J238 106 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 FOXI3A8MTJ6 420 aaPredicted RBP7.3□□□□□ -1.24
YBX3-218ENST00000546298 G3V318 75 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 H0YJW9 148 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 MRPS14O60783 128 aaKnown RBP7.3□□□□□ -1.24
YBX3-218ENST00000546298 APOA2P02652 100 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 SCTP09683 121 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 GADD45AP24522 165 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 MYL9P24844 172 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 CD40LGP29965 261 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 MAP2K4P45985 399 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 INSL3P51460 131 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 TMEM50BP56557 158 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 CLDN12P56749 244 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 RPS16P62249 146 aaKnown RBP7.3□□□□□ -1.24
YBX3-218ENST00000546298 CX3CL1P78423 397 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 ZNF616Q08AN1 781 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 FHL3Q13643 280 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 PYHIN1Q6K0P9 492 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.3□□□□□ -1.24
YBX3-218ENST00000546298 OR4A4PQ8NGN8 299 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 RAB3CQ96E17 227 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 RBMXL1Q96E39 390 aaKnown RBP7.3□□□□□ -1.24
YBX3-218ENST00000546298 TSNAXQ99598 290 aaKnown RBP7.3□□□□□ -1.24
YBX3-218ENST00000546298 B9D2Q9BPU9 175 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 PARP12Q9H0J9 701 aaKnown RBP7.3□□□□□ -1.24
YBX3-218ENST00000546298 KLK15Q9H2R5 256 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 OR1A1Q9P1Q5 309 aa7.3□□□□□ -1.24
YBX3-218ENST00000546298 FOXA2Q9Y261 457 aaPredicted RBP7.3□□□□□ -1.24
YBX3-218ENST00000546298 TMEM272A0A1B0GTI8 110 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 TRDV1A0A1B0GX56 115 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 A0A1W2PN81 502 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 METTL21EPA6NDL7 271 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 I3L521 148 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 LDLRAD4O15165 306 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 FABP7O15540 132 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 SPDEFO95238 335 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 DIRAS3O95661 229 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 TFAP2AP05549 437 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 RAB6AP20340 208 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 GALP22466 123 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 CHRNA7P36544 502 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 ECI1P42126 302 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 LGALS7P47929 136 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 LUMP51884 338 aaPredicted RBP7.29□□□□□ -1.24
YBX3-218ENST00000546298 CRIP2P52943 208 aaPredicted RBP7.29□□□□□ -1.24
YBX3-218ENST00000546298 TAGLNQ01995 201 aaKnown RBP7.29□□□□□ -1.24
YBX3-218ENST00000546298 ARL6IP1Q15041 203 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 ECSCRQ19T08 205 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 ZNF260Q3ZCT1 412 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 PLAC9Q5JTB6 97 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 HES5Q5TA89 166 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 CD200R1LQ6Q8B3 271 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 ZNF562Q6V9R5 426 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 GLDNQ6ZMI3 551 aaPredicted RBP7.29□□□□□ -1.24
YBX3-218ENST00000546298 PPP1R27Q86WC6 154 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 PDPNQ86YL7 162 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 OR10R2Q8NGX6 335 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 FLYWCH2Q96CP2 140 aaKnown RBP7.29□□□□□ -1.24
YBX3-218ENST00000546298 CNBD2Q96M20 576 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 TOLLIPQ9H0E2 274 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 RDH8Q9NYR8 311 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 METTL1Q9UBP6 276 aaKnown RBP7.29□□□□□ -1.24
YBX3-218ENST00000546298 RAB26Q9ULW5 256 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 GAB2Q9UQC2 676 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 NUBP2Q9Y5Y2 271 aa7.29□□□□□ -1.24
YBX3-218ENST00000546298 IFITM5A6NNB3 132 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 M0R1X1 148 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 ARPC1BO15143 372 aaKnown RBP7.28□□□□□ -1.24
YBX3-218ENST00000546298 NHLRC4P0CG21 123 aaPredicted RBP7.28□□□□□ -1.24
YBX3-218ENST00000546298 RAB3BP20337 219 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 TALDO1P37837 337 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 CBX3Q13185 183 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 KIAA0141Q14154 515 aaPredicted RBP7.28□□□□□ -1.24
YBX3-218ENST00000546298 PSG5Q15238 335 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 SSX1Q16384 188 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 AKIRIN2Q53H80 203 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 ACTBL2Q562R1 376 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 UNQ5815/PRO19632Q6UWF5 114 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 ZNF429Q86V71 674 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 DRAXINQ8NBI3 349 aaPredicted RBP7.28□□□□□ -1.24
YBX3-218ENST00000546298 OR10J5Q8NHC4 309 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 OR5B12Q96R08 314 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 CLCC1Q96S66 551 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 Q9H521 79 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 SLA2Q9H6Q3 261 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 GNB4Q9HAV0 340 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.28□□□□□ -1.24
YBX3-218ENST00000546298 NDUFB11Q9NX14 153 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 RBM7Q9Y580 266 aaKnown RBP7.28□□□□□ -1.24
YBX3-218ENST00000546298 A3GALT2U3KPV4 340 aa7.28□□□□□ -1.24
YBX3-218ENST00000546298 IGKV1-6A0A0C4DH72 117 aa7.27□□□□□ -1.25
YBX3-218ENST00000546298 LINC01619G3V211 115 aa7.27□□□□□ -1.25
YBX3-218ENST00000546298 FCN1O00602 326 aa7.27□□□□□ -1.25
YBX3-218ENST00000546298 OVOL1O14753 267 aa7.27□□□□□ -1.25
YBX3-218ENST00000546298 BET1O15155 118 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms