RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 RAG2P55895 527 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 LINC00205P59089 165 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 ACTBP60709 375 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 ACTG1P63261 375 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 EIF4EBP1Q13541 118 aaPredicted RBP8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 TATDN3Q17R31 274 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 CHRFAM7AQ494W8 412 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 CLLU1Q5K131 121 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 GPR157Q5UAW9 335 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 AADACL3Q5VUY0 350 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 OR4C16Q8NGL9 310 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 OR10J5Q8NHC4 309 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 PIFOQ8TCI5 191 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 GIMAP1Q8WWP7 306 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 C22orf15Q8WYQ4 148 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 ABHD14BQ96IU4 210 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 SLC6A7Q99884 636 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 ABHD14AQ9BUJ0 271 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 RAB9BQ9NP90 201 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 NECAP2Q9NVZ3 263 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 OR2W1Q9Y3N9 320 aa8.62□□□□□ -1.03
NPIPB3-210ENST00000542817 OR5H14A6NHG9 310 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 TBPP20226 339 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 EPHA1P21709 976 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 BTCP35070 178 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 TAS2R46P59540 309 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 TAS2R19P59542 299 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 BPIFB3P59826 476 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 CD83Q01151 205 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 DEFB112Q30KQ8 113 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 TPTE2P1Q5T6R2 138 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 STEAP1BQ6NZ63 245 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 ZNF833PQ6ZTB9 187 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 C9orf62Q8N4C0 152 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 OR5H2Q8NGV7 314 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 FXYD6Q9H0Q3 95 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 HRASLSQ9HDD0 168 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 MED9Q9NWA0 146 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 EHFQ9NZC4 300 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 DPM3Q9P2X0 92 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 CDC42EP3Q9UKI2 254 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 RNF150Q9ULK6 438 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 ALG5Q9Y673 324 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 C2CD3Q4AC94 2353 aa8.61□□□□□ -1.03
NPIPB3-210ENST00000542817 SAA2-SAA4A0A096LPE2 208 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 A0A1W2PPI3 338 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 C7orf66A4D0T2 115 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 HSPA12AO43301 675 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 LYRM1O43325 122 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 PPYP01298 95 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 CSF1P09603 554 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 OR8U9P0C7N5 309 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 SAA2P0DJI9 122 aaPredicted RBP8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 HTR1DP28221 377 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 PRRX1P54821 245 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 CTAG1AP78358 180 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 RPL39P5Q59GN2 51 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 MINOS1Q5TGZ0 78 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 TEX261Q6UWH6 196 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 OR2AK2Q8NG84 335 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 OR13C8Q8NGS7 320 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 OR8U1Q8NH10 309 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 OR56B4Q8NH76 319 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 LRRC20Q8TCA0 184 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 CFHR4Q92496 578 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 MOB3AQ96BX8 217 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 MALSU1Q96EH3 234 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 CITED4Q96RK1 184 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 GINS4Q9BRT9 223 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 ZNF2Q9BSG1 426 aaPredicted RBP8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 MEGF9Q9H1U4 602 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 SDHAF2Q9NX18 166 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 GAB2Q9UQC2 676 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 TBL2Q9Y4P3 447 aaKnown RBP8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 MINOS1-NBL1R4GNA1 71 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 U3KQ87 197 aa8.6□□□□□ -1.03
NPIPB3-210ENST00000542817 DNHD1Q96M86 4753 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 FAM240BA0A1B0GVZ2 78 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 INMT-MINDY4F8WBC2 141 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 TRIM77I1YAP6 450 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 TOR1AO14656 332 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 RGS11O94810 467 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 RAB3DO95716 219 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 IFNA7P01567 189 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 GNRHRP30968 328 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 BRWD1-AS2P59051 145 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 ZNF816Q0VGE8 651 aaPredicted RBP8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 HABP2Q14520 560 aaPredicted RBP8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 ACTBL2Q562R1 376 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 TOR2AQ5JU69 321 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 TRIQKQ629K1 86 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 LYG1Q8N1E2 194 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 RTN4IP1Q8WWV3 396 aaPredicted RBP8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 EDARADDQ8WWZ3 215 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 BEX2Q9BXY8 128 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 ESM1Q9NQ30 184 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 SLC2A8Q9NY64 477 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 TAS2R8Q9NYW2 309 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 HILPDAQ9Y5L2 63 aa8.59□□□□□ -1.03
NPIPB3-210ENST00000542817 TENM1Q9UKZ4 2725 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms