RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SGCEO43556 437 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 CHP2O43745 196 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 GATBO75879 557 aaKnown RBP2.84□□□□□ -1.95
SNHG1-217ENST00000541578 TNFP01375 233 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 IFNA10P01566 189 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF688P0C7X2 276 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 IGHV1-8P0DP01 117 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 HSD11B1P28845 292 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 CDC34P49427 236 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-217ENST00000541578 OR2B6P58173 313 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 AP3S2P59780 193 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ACTBP60709 375 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ARF6P62330 175 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ACTG1P63261 375 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 PSPHP78330 225 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 CRADDP78560 199 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 CCL7P80098 99 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 INCA1Q0VD86 236 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 TRIP13Q15645 432 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-217ENST00000541578 DEFB109BQ30KR1 87 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 BSXQ3C1V8 233 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 MPV17L2Q567V2 206 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF691Q5VV52 312 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 HACD4Q5VWC8 232 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 STEAP4Q687X5 459 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 TMEM215Q68D42 235 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 RPL13AP3Q6NVV1 102 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 GUSBP11Q6P575 273 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 Q6ZVH6 145 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 SSX7Q7RTT5 188 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 CYP4Z1Q86W10 505 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 MKXQ8IYA7 352 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 LGI3Q8N145 548 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF561Q8N587 486 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 Q8N976 141 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 OR5W2Q8NH69 310 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 C22orf15Q8WYQ4 148 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 TMBIM1Q969X1 311 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF75AQ96N20 296 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 FOPNLQ96NB1 174 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 RSG1Q9BU20 258 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 MND1Q9BWT6 205 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 CHRNA10Q9GZZ6 450 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ABCB9Q9NP78 766 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 EXOSC4Q9NPD3 245 aaKnown RBP2.84□□□□□ -1.95
SNHG1-217ENST00000541578 BIN3Q9NQY0 253 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 MS4A12Q9NXJ0 267 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 GLTPQ9NZD2 209 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 NAGKQ9UJ70 344 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ZNF257Q9Y2Q1 563 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 NDUFAF1Q9Y375 327 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 TSSC4Q9Y5U2 329 aaPredicted RBP2.84□□□□□ -1.95
SNHG1-217ENST00000541578 ABCA2Q9BZC7 2435 aa2.84□□□□□ -1.95
SNHG1-217ENST00000541578 SHANK1Q9Y566 2161 aa2.84□□□□□ -1.96
SNHG1-217ENST00000541578 HIVEP1P15822 2718 aa2.84□□□□□ -1.96
SNHG1-217ENST00000541578 A0A1B0GTI1 187 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 A0A1B0GV90 55 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 SLC5A10A0PJK1 596 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 PINLYPA6NC86 204 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 LINC00862A6NCI5 91 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 C10orf142B7Z368 130 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 TMEM238C9JI98 176 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 D6RAR5 112 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 LINC01619G3V211 115 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 PLPP3O14495 311 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 PHYHO14832 338 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 SNAI2O43623 268 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF861PO60384 105 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 MED6O75586 246 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 FOXH1O75593 365 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 REM1O75628 298 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 RP2O75695 350 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 GUSBP08236 651 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 PSMB5P28074 263 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 LOXP28300 417 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 CD70P32970 193 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 RPA3P35244 121 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 PSMD8P48556 350 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 SRP9P49458 86 aaKnown RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 PRLHRP49683 370 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 AKR1D1P51857 326 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 CXCR4P61073 352 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 GNG11P61952 73 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 CKAP4Q07065 602 aaKnown RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 PNOCQ13519 176 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 EIF4EBP2Q13542 120 aaPredicted RBP2.83□□□□□ -1.96
SNHG1-217ENST00000541578 GOLGA7BQ2TAP0 167 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 DEFB133Q30KQ1 61 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 ACTBL2Q562R1 376 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 COQ5Q5HYK3 327 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 TTC32Q5I0X7 151 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 TSPO2Q5TGU0 170 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 LINC01551Q86U37 167 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 WDFY1Q8IWB7 410 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 STK40Q8N2I9 435 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 ACBD4Q8NC06 268 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 SFXN5Q8TD22 340 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 FAM172AQ8WUF8 416 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 GHSRQ92847 366 aa2.83□□□□□ -1.96
SNHG1-217ENST00000541578 FLYWCH2Q96CP2 140 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 154.4 ms