RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 RXFP4Q8TDU9 374 aa14.94□□□□□ -0.02
GNE-204ENST00000539208 NCOR1P1Q9H4R4 102 aa14.94□□□□□ -0.02
GNE-204ENST00000539208 CHD3Q12873 2000 aaKnown RBP14.93□□□□□ -0.02
GNE-204ENST00000539208 FOLR2P14207 255 aa14.93□□□□□ -0.02
GNE-204ENST00000539208 GATA4P43694 442 aa14.93□□□□□ -0.02
GNE-204ENST00000539208 RPS23P62266 143 aaKnown RBP14.93□□□□□ -0.02
GNE-204ENST00000539208 SOHLH1Q5JUK2 328 aa14.93□□□□□ -0.02
GNE-204ENST00000539208 AVPI1Q5T686 147 aa14.93□□□□□ -0.02
GNE-204ENST00000539208 CD300LFQ8TDQ1 290 aa14.93□□□□□ -0.02
GNE-204ENST00000539208 JPT1Q9UK76 154 aa14.93□□□□□ -0.02
GNE-204ENST00000539208 PSG11Q9UQ72 335 aa14.93□□□□□ -0.02
GNE-204ENST00000539208 CNOT1A5YKK6 2376 aaKnown RBP14.93□□□□□ -0.02
GNE-204ENST00000539208 OR2B11Q5JQS5 317 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 BTNL3Q6UXE8 466 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 LILRB2Q8N423 598 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 DCTN5Q9BTE1 182 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 WDR61Q9GZS3 305 aaKnown RBP14.92□□□□□ -0.02
GNE-204ENST00000539208 HEATR1Q9H583 2144 aaKnown RBP14.92□□□□□ -0.02
GNE-204ENST00000539208 IGHV3-43A0A0B4J1X8 118 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 LINC00473A8K010 186 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 A8MXE2 369 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 YPEL1O60688 119 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 HSPB1P04792 205 aaKnown RBP14.92□□□□□ -0.02
GNE-204ENST00000539208 OR13C7P0DN81 318 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 IGHV3-43DP0DP04 118 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 EDDM3AQ14507 147 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 ETV3LQ6ZN32 361 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 MOGAT3Q86VF5 341 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 CLDND2Q8NHS1 167 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 YPEL2Q96QA6 119 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 CLCC1Q96S66 551 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 RSG1Q9BU20 258 aa14.92□□□□□ -0.02
GNE-204ENST00000539208 MRPL37Q9BZE1 423 aaKnown RBP14.92□□□□□ -0.02
GNE-204ENST00000539208 M0R036 132 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 ST8SIA5O15466 376 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 TSPAN9O75954 239 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 CRYBA1P05813 215 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 SNRNP70P08621 437 aaKnown RBP14.91□□□□□ -0.02
GNE-204ENST00000539208 SRP19P09132 144 aaKnown RBP14.91□□□□□ -0.02
GNE-204ENST00000539208 ICAM4Q14773 271 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 ATP6V1FQ16864 119 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 MORN2Q502X0 79 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 ALKBH2Q6NS38 261 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 MBD3L1Q8WWY6 194 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 OR4C12Q96R67 309 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 F2RL2O00254 374 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 SCAF4O95104 1147 aaKnown RBP14.91□□□□□ -0.02
GNE-204ENST00000539208 SLC38A11Q08AI6 406 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 Q3ZCU0 254 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 KHDC3LQ587J8 217 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 SPRNQ5BIV9 151 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 H2BFWTQ7Z2G1 175 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 FAM222BQ8WU58 562 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 CIB3Q96Q77 187 aaPredicted RBP14.91□□□□□ -0.02
GNE-204ENST00000539208 RPRMQ9NS64 109 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 TIMM9Q9Y5J7 89 aa14.91□□□□□ -0.02
GNE-204ENST00000539208 DMXL1Q9Y485 3027 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 DEFB108AA8MXU0 73 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 FAM180AQ6UWF9 173 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 CENPVQ7Z7K6 275 aaPredicted RBP14.9□□□□□ -0.02
GNE-204ENST00000539208 ITLN1Q8WWA0 313 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 PINX1Q96BK5 328 aaKnown RBP14.9□□□□□ -0.02
GNE-204ENST00000539208 MKRN2OSH3BPM6 223 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 SPRY3O43610 288 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 DUTP33316 252 aaKnown RBP14.9□□□□□ -0.02
GNE-204ENST00000539208 GPR12P47775 334 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 SELENOVP59797 346 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 HAGHQ16775 308 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 RNF212Q495C1 297 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 AKIRIN2Q53H80 203 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 OR10G4Q8NGN3 311 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 TAF15Q92804 592 aaKnown RBP eCLIP14.9□□□□□ -0.02
GNE-204ENST00000539208 C14orf79Q96F83 325 aa14.9□□□□□ -0.02
GNE-204ENST00000539208 IGHV3OR15-7A0A075B7D8 119 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 FAM90A9PA6NNJ1 464 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 NDUFA2O43678 99 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 CGB3P0DN86 165 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 CGB7P0DN87 165 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 AKR1C3P42330 323 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 RAB13P51153 203 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 LOXL3P58215 753 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 AARDQ4LEZ3 155 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 OR6C3Q9NZP0 311 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 GNG12Q9UBI6 72 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 IL19Q9UHD0 177 aa14.89□□□□□ -0.03
GNE-204ENST00000539208 ITGB1BP1O14713 200 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 PROP1O75360 226 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 MT-ND4LP03901 98 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 FAM27E3Q08E93 113 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 TMEM41BQ5BJD5 291 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 VHLLQ6RSH7 139 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 DTD1Q8TEA8 209 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 RAB9BQ9NP90 201 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 GAB2Q9UQC2 676 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 KLF2Q9Y5W3 355 aaPredicted RBP14.88□□□□□ -0.03
GNE-204ENST00000539208 SPENQ96T58 3664 aaKnown RBP14.88□□□□□ -0.03
GNE-204ENST00000539208 MARCH11A6NNE9 402 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 PMS2P5A8MQ11 134 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 NCR3LG1Q68D85 454 aa14.88□□□□□ -0.03
GNE-204ENST00000539208 ZNF561Q8N587 486 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms