RNA–Protein interactions for RNA: ENST00000535399.1

SFSWAP-204, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 778 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-204ENST00000535399 FAM131AQ6UXB0 335 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 GLDNQ6ZMI3 551 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 OR8H1Q8NGG4 311 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 DYNC2LI1Q8TCX1 351 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 WIPF2Q8TF74 440 aaPredicted RBP18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 SNAPC3Q92966 411 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 C5orf30Q96GV9 206 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 OR2D2Q9H210 308 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 ANAPC10Q9UM13 185 aa18.04■□□□□ 0.48
SFSWAP-204ENST00000535399 MEIS3P1A6NDR6 274 aa18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 NCBP2LA6PVI3 153 aaKnown RBP18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 FCER2P06734 321 aa18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 NFYAP23511 347 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 F2RL1P55085 397 aa18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 LINC00205P59089 165 aa18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 ARSJQ5FYB0 599 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 DRAXINQ8NBI3 349 aaPredicted RBP18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 OR5AN1Q8NGI8 311 aa18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 RITA1Q96K30 269 aa18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 SDHAF2Q9NX18 166 aa18.03■□□□□ 0.48
SFSWAP-204ENST00000535399 SMIM31A0A1B0GVY4 71 aa18.02■□□□□ 0.48
SFSWAP-204ENST00000535399 NOL3O60936 208 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-204ENST00000535399 SOX6P35712 828 aa18.02■□□□□ 0.48
SFSWAP-204ENST00000535399 C9orf152Q5JTZ5 239 aa18.02■□□□□ 0.48
SFSWAP-204ENST00000535399 ZNF383Q8NA42 475 aa18.02■□□□□ 0.48
SFSWAP-204ENST00000535399 CCDC59Q9P031 241 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-204ENST00000535399 MRPS7Q9Y2R9 242 aaKnown RBP18.02■□□□□ 0.48
SFSWAP-204ENST00000535399 OR2W1Q9Y3N9 320 aa18.02■□□□□ 0.48
SFSWAP-204ENST00000535399 TRRAPQ9Y4A5 3859 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 OR5H14A6NHG9 310 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 FAM25AB3EWG3 89 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 FAM25CB3EWG5 89 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 FAM25GB3EWG6 89 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 M0R1X1 148 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 TUSC2O75896 110 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 PRSS3P35030 304 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 ARPC4P59998 168 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 ACTBP60709 375 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 FAM71E2Q8N5Q1 922 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 MIXL1Q9H2W2 232 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 IFT46Q9NQC8 304 aa18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 RBM7Q9Y580 266 aaKnown RBP18.01■□□□□ 0.47
SFSWAP-204ENST00000535399 NAT1P18440 290 aa18■□□□□ 0.47
SFSWAP-204ENST00000535399 CNTFRP26992 372 aa18■□□□□ 0.47
SFSWAP-204ENST00000535399 MC5RP33032 325 aa18■□□□□ 0.47
SFSWAP-204ENST00000535399 SNX29P2Q8IUI4 249 aa18■□□□□ 0.47
SFSWAP-204ENST00000535399 SGMS2Q8NHU3 365 aa18■□□□□ 0.47
SFSWAP-204ENST00000535399 GPX8Q8TED1 209 aa18■□□□□ 0.47
SFSWAP-204ENST00000535399 LIN7CQ9NUP9 197 aaKnown RBP18■□□□□ 0.47
SFSWAP-204ENST00000535399 WASHC3Q9Y3C0 194 aa18■□□□□ 0.47
SFSWAP-204ENST00000535399 IGKV1D-13A0A0B4J2D9 117 aa17.99■□□□□ 0.47
SFSWAP-204ENST00000535399 J3QRK9 145 aa17.99■□□□□ 0.47
SFSWAP-204ENST00000535399 IGKV1-13P0DP09 117 aa17.99■□□□□ 0.47
SFSWAP-204ENST00000535399 MMDQ15546 238 aa17.99■□□□□ 0.47
SFSWAP-204ENST00000535399 OR5AP2Q8NGF4 316 aa17.99■□□□□ 0.47
SFSWAP-204ENST00000535399 RBM38Q9H0Z9 239 aaKnown RBP17.99■□□□□ 0.47
SFSWAP-204ENST00000535399 NECAP2Q9NVZ3 263 aa17.99■□□□□ 0.47
SFSWAP-204ENST00000535399 CTDSP2O14595 271 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 PEX14O75381 377 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 IGHG2P01859 326 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 OR5H8P0DN80 308 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 LUMP51884 338 aaPredicted RBP17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 HIST2H2BDQ6DRA6 164 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 C11orf44Q8N8P7 122 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 NPBQ8NG41 125 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 RASL11BQ9BPW5 248 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 SCPEP1Q9HB40 452 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 EXTL2Q9UBQ6 330 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 ADAM30Q9UKF2 790 aa17.98■□□□□ 0.47
SFSWAP-204ENST00000535399 LINC01548A6NM66 108 aa17.97■□□□□ 0.47
SFSWAP-204ENST00000535399 H7C2Y5 167 aa17.97■□□□□ 0.47
SFSWAP-204ENST00000535399 FCGR2CP31995 323 aa17.97■□□□□ 0.47
SFSWAP-204ENST00000535399 CDK10Q15131 360 aa17.97■□□□□ 0.47
SFSWAP-204ENST00000535399 LAX1Q8IWV1 398 aa17.97■□□□□ 0.47
SFSWAP-204ENST00000535399 ZNF645Q8N7E2 425 aa17.97■□□□□ 0.47
SFSWAP-204ENST00000535399 SLIRPQ9GZT3 109 aaKnown RBP17.97■□□□□ 0.47
SFSWAP-204ENST00000535399 NBR2O15453 112 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 RBBP9O75884 186 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 NDUFA3O95167 84 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 IGLV2-14P01704 120 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 IGKV1-16P04430 117 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 CD28P10747 220 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 AADACP22760 399 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 SLC35E3Q7Z769 313 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 PDPNQ86YL7 162 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 RNF5Q99942 180 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 SLC35D1Q9NTN3 355 aa17.96■□□□□ 0.47
SFSWAP-204ENST00000535399 SULT1C2O00338 296 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 RGS5O15539 181 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 FBXO24O75426 580 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 TPPPO94811 219 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 APOA2P02652 100 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 DUTP33316 252 aaKnown RBP17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 THBS3P49746 956 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 C5orf64Q2M2E5 130 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 PRR31Q5SQ13 230 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 CENPVQ7Z7K6 275 aaPredicted RBP17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 LYSMD2Q8IV50 215 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 GIMAP1Q8WWP7 306 aa17.95■□□□□ 0.46
SFSWAP-204ENST00000535399 NOL4LQ96MY1 436 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms