RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PAQR9Q6ZVX9 377 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM57BQ71RH2 274 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 CPEB2Q7Z5Q1 589 aaKnown RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PPP1R27Q86WC6 154 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF575Q86XF7 245 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 BPIFA4PQ86YQ2 179 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SAXO1Q8IYX7 474 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZADH2Q8N4Q0 377 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 C2orf73Q8N5S3 287 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 METTL27Q8N6F8 245 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZFP62Q8NB50 900 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADAD2Q8NCV1 583 aaKnown RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR4X2Q8NGF9 303 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ATP6V0E2Q8NHE4 81 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 KCNG3Q8TAE7 436 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR5P3Q8WZ94 311 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADTRPQ96IZ2 230 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 MCHR1Q99705 422 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PDCD1LG2Q9BQ51 273 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 NDFIP1Q9BT67 221 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PECRQ9BY49 303 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR2D2Q9H210 308 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 MAP1LC3AQ9H492 121 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 THYN1Q9P016 225 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ANXA10Q9UJ72 324 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ERRFI1Q9UJM3 462 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ANAPC10Q9UM13 185 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 INSL5Q9Y5Q6 135 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 IER3IP1Q9Y5U9 82 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SPCS1Q9Y6A9 102 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 NUP214P35658 2090 aaPredicted RBP4.09□□□□□ -1.76
HMGB1P19-201ENST00000517578 MUC21A0A0G2JKD1 596 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MUC21A0A140T8X8 626 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MDFIC2A0A1B0GVS7 189 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 FABP5P3A8MUU1 101 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 GRXCR1A8MXD5 290 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 B5MCH6 92 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SAP18O00422 153 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 HMGN4O00479 90 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 FCN1O00602 326 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ISLRO14498 428 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ERI3O43414 337 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MPZL1O95297 269 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 BRI3O95415 125 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGHG3P01860 377 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 HLA-DQA1P01909 254 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 EDN1P05305 212 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 H2BFMP0C1H6 154 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 C3orf79P0CE67 100 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SP9P0CG40 484 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 CXCL8P10145 99 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF17P17021 662 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ID1P41134 155 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 HELZP42694 1942 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ATP5J2P56134 94 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 NANOS3P60323 173 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 UBE2G1P62253 170 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 FAM110CQ1W6H9 321 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 DCAF4L1Q3SXM0 396 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 TTC32Q5I0X7 151 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MUC21Q5SSG8 566 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 GLYATL3Q5SZD4 288 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 Q6ZRM9 215 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 LRRC75A-AS1Q8N1F1 130 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR10G8Q8NGN5 311 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR9G4Q8NGQ1 327 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR2AJ1Q8NGZ0 328 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR10D3Q8NH80 312 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF502Q8TBZ5 544 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 CLEC4CQ8WTT0 213 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 LSM10Q969L4 123 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 DNAJC30Q96LL9 226 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 LMF2Q9BU23 707 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM70Q9BUB7 260 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 C5orf66Q9H5L9 145 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 UBTD1Q9HAC8 227 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SLC39A9Q9NUM3 307 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 TFCP2L1Q9NZI6 479 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 CRLS1Q9UJA2 301 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 VPREB3Q9UKI3 123 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SIGLEC9Q9Y336 463 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 YTHDF2Q9Y5A9 579 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SOX21Q9Y651 276 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 LY96Q9Y6Y9 160 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MYLKQ15746 1914 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 PCSK5Q92824 1860 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 TEX48A0A1B0GUV7 120 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A1W2PP11 408 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 MBLAC1A4D2B0 266 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 OOEPA6NGQ2 149 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 LIPT2A6NK58 231 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZFP92A6NM28 416 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 F5H5K5 113 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 CRXO43186 299 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 DNPH1O43598 174 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 FCN3O75636 299 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms