RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 PAQR9Q6ZVX9 377 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 FAM57BQ71RH2 274 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 CPEB2Q7Z5Q1 589 aaKnown RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PPP1R27Q86WC6 154 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZNF575Q86XF7 245 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 BPIFA4PQ86YQ2 179 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SAXO1Q8IYX7 474 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZADH2Q8N4Q0 377 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 C2orf73Q8N5S3 287 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 METTL27Q8N6F8 245 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ZFP62Q8NB50 900 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADAD2Q8NCV1 583 aaKnown RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR4X2Q8NGF9 303 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ATP6V0E2Q8NHE4 81 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 KCNG3Q8TAE7 436 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR5P3Q8WZ94 311 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ADTRPQ96IZ2 230 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 MCHR1Q99705 422 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PDCD1LG2Q9BQ51 273 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 NDFIP1Q9BT67 221 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 VN1R3Q9BXE9 311 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 PECRQ9BY49 303 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 OR2D2Q9H210 308 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 MAP1LC3AQ9H492 121 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 THYN1Q9P016 225 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ANXA10Q9UJ72 324 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ERRFI1Q9UJM3 462 aaPredicted RBP4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 ANAPC10Q9UM13 185 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 INSL5Q9Y5Q6 135 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 IER3IP1Q9Y5U9 82 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 SPCS1Q9Y6A9 102 aa4.09□□□□□ -1.75
HMGB1P19-201ENST00000517578 NUP214P35658 2090 aaPredicted RBP4.09□□□□□ -1.76
HMGB1P19-201ENST00000517578 MUC21A0A0G2JKD1 596 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MUC21A0A140T8X8 626 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MDFIC2A0A1B0GVS7 189 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A1W2PPM0 123 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 FABP5P3A8MUU1 101 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 GRXCR1A8MXD5 290 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 B5MCH6 92 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SAP18O00422 153 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 HMGN4O00479 90 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 FCN1O00602 326 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ISLRO14498 428 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ERI3O43414 337 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MPZL1O95297 269 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 BRI3O95415 125 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 IGHG3P01860 377 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 HLA-DQA1P01909 254 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 EDN1P05305 212 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 H2BFMP0C1H6 154 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 C3orf79P0CE67 100 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SP9P0CG40 484 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 CXCL8P10145 99 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF17P17021 662 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ID1P41134 155 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 HELZP42694 1942 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ATP5J2P56134 94 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 NANOS3P60323 173 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 UBE2G1P62253 170 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 RPS28P62857 69 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 FAM110CQ1W6H9 321 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 DCAF4L1Q3SXM0 396 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 TTC32Q5I0X7 151 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MUC21Q5SSG8 566 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 GLYATL3Q5SZD4 288 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 Q6ZRM9 215 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 LRRC75A-AS1Q8N1F1 130 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR10G8Q8NGN5 311 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR9G4Q8NGQ1 327 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR2AJ1Q8NGZ0 328 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 OR10D3Q8NH80 312 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZNF502Q8TBZ5 544 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 CLEC4CQ8WTT0 213 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 LSM10Q969L4 123 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 DNAJC30Q96LL9 226 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 LMF2Q9BU23 707 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 TMEM70Q9BUB7 260 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 C5orf66Q9H5L9 145 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 UBTD1Q9HAC8 227 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SLC39A9Q9NUM3 307 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 TFCP2L1Q9NZI6 479 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 CRLS1Q9UJA2 301 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 VPREB3Q9UKI3 123 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SIGLEC9Q9Y336 463 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 YTHDF2Q9Y5A9 579 aaKnown RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 SOX21Q9Y651 276 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 LY96Q9Y6Y9 160 aa4.08□□□□□ -1.76
HMGB1P19-201ENST00000517578 MYLKQ15746 1914 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 PCSK5Q92824 1860 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 TEX48A0A1B0GUV7 120 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 A0A1W2PP11 408 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 MBLAC1A4D2B0 266 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 OOEPA6NGQ2 149 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 LIPT2A6NK58 231 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 ZFP92A6NM28 416 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 F5H5K5 113 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 CRXO43186 299 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 DNPH1O43598 174 aa4.07□□□□□ -1.76
HMGB1P19-201ENST00000517578 FCN3O75636 299 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms