RNA–Protein interactions for RNA: ENST00000516956.1

SCARNA16.4-201, small Cajal body-specific RNA 16, humanhuman

BASIC

Gene SCARNA16, Length 187 nt, Biotype scaRNA, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA16.4-201ENST00000516956 SLC31A2O15432 143 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ATG12O94817 140 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 MOSP00540 346 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SAA2P0DJI9 122 aaPredicted RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 IL7P13232 177 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 KIR2DS2P43631 304 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNF134P52741 427 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ERVK-16P61578 105 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 RPS16P62249 146 aaKnown RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 HNF4GQ14541 408 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 HERPUD1Q15011 391 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 RPL39P5Q59GN2 51 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 AADACL3Q5VUY0 350 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DHRS7BQ6IAN0 325 aaPredicted RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 FAM53AQ6NSI3 398 aaPredicted RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DHRS11Q6UWP2 260 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNF66Q6ZN08 573 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 IDO2Q6ZQW0 420 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 LIAT1Q6ZQX7 453 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 KCTD9Q7L273 389 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 LDLRAD3Q86YD5 345 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 LYSMD2Q8IV50 215 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DRAM1Q8N682 238 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNF439Q8NDP4 499 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 OR4C16Q8NGL9 310 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 OR4C13Q8NGP0 309 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 OR56B4Q8NH76 319 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TERB2Q8NHR7 220 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 RNASE11Q8TAA1 199 aaKnown RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CD300LFQ8TDQ1 290 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 MOB3AQ96BX8 217 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 FLYWCH2Q96CP2 140 aaKnown RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNF486Q96H40 463 aaPredicted RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CYYR1Q96J86 154 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TSNAXQ99598 290 aaKnown RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 RASL11BQ9BPW5 248 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SOSTQ9BQB4 213 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TINAGL1Q9GZM7 467 aaPredicted RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 NPFFR1Q9GZQ6 430 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 TOLLIPQ9H0E2 274 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 IFI27L2Q9H2X8 130 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 CCL28Q9NRJ3 127 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 SLC35D1Q9NTN3 355 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ZNRD1Q9P1U0 126 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 ANAPC10Q9UM13 185 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 GAB2Q9UQC2 676 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 KCNIP3Q9Y2W7 256 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 RBMX2Q9Y388 322 aaKnown RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 WASHC3Q9Y3C0 194 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 YLPM1P49750 1951 aaKnown RBP4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 DOCK11Q5JSL3 2073 aa4.41□□□□□ -1.7
SCARNA16.4-201ENST00000516956 NBPF19A0A087WUL8 3843 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 IGHV3-72A0A0B4J1Y9 119 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FAM240BA0A1B0GVZ2 78 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 DNAJC9-AS1A6NH13 148 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 VGLL3A8MV65 326 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 LY6LH3BQJ8 138 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SHOXO15266 292 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TNFSF12O43508 249 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CREBL2O60519 120 aaPredicted RBP4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 FCGR3BO75015 233 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ACTL6BO94805 426 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 HRASP01112 189 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 IGKV1D-33P01593 117 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 IGKV1-33P01594 117 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 IGHV4-59P01825 116 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 CD74P04233 296 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RLN1P04808 185 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SERPINE2P07093 398 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SNRNP70P08621 437 aaKnown RBP4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ANXA3P12429 323 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 IER3P46695 156 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 DYNLT3P51808 116 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ZNF137PP52743 207 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 UCP3P55916 312 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 RAB25P57735 213 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 HILS1P60008 231 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 LSAMPQ13449 338 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SURF2Q15527 256 aaPredicted RBP4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SLC9A3R2Q15599 337 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 MSMO1Q15800 293 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ZNF79Q15937 498 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TRIM16LQ309B1 348 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 VMA21Q3ZAQ7 101 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 PHLDA2Q53GA4 152 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 C9orf152Q5JTZ5 239 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 Q6ZPA2 131 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 ZNF833PQ6ZTB9 187 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 C16orf82Q7Z2V1 217 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TMED4Q7Z7H5 227 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 THNSL2Q86YJ6 484 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 PDPNQ86YL7 162 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 LURAP1LQ8IV03 231 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 SGPP2Q8IWX5 399 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 MFSD4AQ8N468 514 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 TCTEX1D1Q8N7M0 179 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 DRAXINQ8NBI3 349 aaPredicted RBP4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 BVESQ8NE79 360 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR8H1Q8NGG4 311 aa4.4□□□□□ -1.71
SCARNA16.4-201ENST00000516956 OR51S1Q8NGJ8 323 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms