RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 FRZBQ92765 325 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 RBMXL1Q96E39 390 aaKnown RBP1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 REEP6Q96HR9 211 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 ABHD14BQ96IU4 210 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 PPP1R2P1Q96PQ5 205 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 ENY2Q9NPA8 101 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 BIN3Q9NQY0 253 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 CA10Q9NS85 328 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF355PQ9NSJ1 428 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 TAS2R7Q9NYW3 318 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 CARHSP1Q9Y2V2 147 aaKnown RBP1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 WASHC3Q9Y3C0 194 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 PCYT1BQ9Y5K3 369 aaPredicted RBP1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 VWA8A3KMH1 1905 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 KIF15Q9NS87 1388 aa1.44□□□□□ -2.18
HMGB1P35-201ENST00000503360 DYSFO75923 2080 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 DOCK9Q9BZ29 2069 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 ATRNO75882 1429 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHV1-3A0A0C4DH29 117 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 FUOMA2VDF0 154 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 C5orf63A6NC05 138 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR6C6A6NF89 314 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 FAM159BA6NKW6 160 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 MRASO14807 208 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 ATG12O94817 140 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 WISP3O95389 354 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 LTAP01374 205 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHG2P01859 326 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 HMGN1P05114 100 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 SEC11BP0C7V7 166 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 SULT1A3P0DMM9 295 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 SULT1A4P0DMN0 295 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 FGF6P10767 208 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 ESDP10768 282 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 IDO1P14902 403 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 IL1RNP18510 177 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 ORM2P19652 201 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 CNTFRP26992 372 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR10J1P30954 320 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 GABRA3P34903 492 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 CA7P43166 264 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 MAP2K4P45985 399 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 TAS2R41P59536 307 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 HSPE1P61604 102 aaKnown RBP1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 HERVK_113P63121 156 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 FABP9Q0Z7S8 132 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 PLPPR5Q32ZL2 321 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 FAM104BQ5XKR9 115 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 LAIR2Q6ISS4 152 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 LPCAT3Q6P1A2 487 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 C5orf46Q6UWT4 87 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 ALKAL1Q6UXT8 129 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 NTM-AS1Q6ZSK4 140 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 TMEM144Q7Z5S9 345 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 MARCH3Q86UD3 253 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 H1FOOQ8IZA3 346 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 ZNF567Q8N184 647 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 DEFB125Q8N687 156 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 YIPF7Q8N8F6 280 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR51A2Q8NGJ7 313 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR10A6Q8NH74 314 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR13C6PQ8NH95 151 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 GNPDA2Q8TDQ7 276 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 MS4A6EQ96DS6 147 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 RMI2Q96E14 147 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 SLC25A44Q96H78 314 aaPredicted RBP1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 DERL3Q96Q80 235 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 MED28Q9H204 178 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 WFDC1Q9HC57 220 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 C21orf62Q9NYP8 219 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 TAS2R1Q9NYW7 299 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 IDI2-AS1Q9NZ38 188 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 MRPL27Q9P0M9 148 aaKnown RBP1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 PYCARDQ9ULZ3 195 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 UFC1Q9Y3C8 167 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 PXMP4Q9Y6I8 212 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 SLIT3O75094 1523 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 PCM1Q15154 2024 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 CABIN1Q9Y6J0 2220 aa1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 SETD1AO15047 1707 aaKnown RBP1.43□□□□□ -2.18
HMGB1P35-201ENST00000503360 DCCP43146 1447 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 HMCN1Q96RW7 5635 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHV3OR15-7A0A075B7D8 119 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 TMED7-TICAM2A0A0A6YYA0 188 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGKV1-6A0A0C4DH72 117 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGHV1-69-2A0A0G2JMI3 117 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 hADV38S2A0JD32 116 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 TMEM150BA6NC51 233 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 LRCOL1A6NCL2 159 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 OR4C45A6NMZ5 311 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 KNCNA6PVL3 124 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 TSTD3H0UI37 97 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 FAAHO00519 579 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 BET1O15155 118 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 RBFOX2O43251 390 aaKnown RBP eCLIP1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGKV1-39P01597 117 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGLV3-27P01718 113 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 IGKV1D-39P04432 117 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 SERPINA7P05543 415 aa1.42□□□□□ -2.18
HMGB1P35-201ENST00000503360 NBEAP1P0C6P0 100 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms