RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 ZNF645Q8N7E2 425 aa20.62■□□□□ 0.89
DDX41-202ENST00000503078 SCCPDHQ8NBX0 429 aa20.62■□□□□ 0.89
DDX41-202ENST00000503078 RAB24Q969Q5 203 aa20.62■□□□□ 0.89
DDX41-202ENST00000503078 HES7Q9BYE0 225 aa20.62■□□□□ 0.89
DDX41-202ENST00000503078 POLDIP2Q9Y2S7 368 aa20.62■□□□□ 0.89
DDX41-202ENST00000503078 A0A1W2PPQ1 181 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 MAGEA5P43359 124 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 PDLIM4P50479 330 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 FFAR4Q5NUL3 377 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 PEAR1Q5VY43 1037 aaPredicted RBP20.61■□□□□ 0.89
DDX41-202ENST00000503078 CLN8Q9UBY8 286 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 PMS2P5A8MQ11 134 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 SLC31A2O15432 143 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 KRASP01116 189 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 P0C879 139 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 RNF224P0DH78 156 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 G6PCP35575 357 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 ZBTB34Q8NCN2 500 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 R4GN57 208 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 VPS13AQ96RL7 3174 aa20.61■□□□□ 0.89
DDX41-202ENST00000503078 LRRC30A6NM36 301 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 GYPAP02724 150 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 COX5AP20674 150 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 IDH3GP51553 393 aaPredicted RBP20.6■□□□□ 0.89
DDX41-202ENST00000503078 CLEC12BQ2HXU8 276 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 GP6Q9HCN6 339 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 MED12LQ86YW9 2145 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 ODAMA1E959 279 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 SH2D1BO14796 132 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 NUBP1P53384 320 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 ZNF146Q15072 292 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 DBX2Q6ZNG2 339 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 MCEMP1Q8IX19 187 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 OR10P1Q8NGE3 313 aa20.6■□□□□ 0.89
DDX41-202ENST00000503078 NOL4LQ96MY1 436 aaPredicted RBP20.6■□□□□ 0.89
DDX41-202ENST00000503078 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.6■□□□□ 0.89
DDX41-202ENST00000503078 A8MWP6 167 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 LAMTOR5O43504 91 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 GGCTO75223 188 aaKnown RBP20.59■□□□□ 0.89
DDX41-202ENST00000503078 GCGP01275 180 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 ACTL10Q5JWF8 245 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 ZNF664Q8N3J9 261 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 OR2T10Q8NGZ9 312 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 TTTY12Q9BZ98 90 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 NXPH2O95156 264 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 SRP14P37108 136 aaKnown RBP20.59■□□□□ 0.89
DDX41-202ENST00000503078 TAS2R60P59551 318 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 TFF3Q07654 80 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 ZNF816Q0VGE8 651 aaPredicted RBP20.59■□□□□ 0.89
DDX41-202ENST00000503078 NEIL1Q96FI4 390 aaPredicted RBP20.59■□□□□ 0.89
DDX41-202ENST00000503078 OR2D2Q9H210 308 aa20.59■□□□□ 0.89
DDX41-202ENST00000503078 PAGE4O60829 102 aa20.58■□□□□ 0.89
DDX41-202ENST00000503078 VENTXO95231 258 aa20.58■□□□□ 0.89
DDX41-202ENST00000503078 RPL30P62888 115 aaKnown RBP20.58■□□□□ 0.89
DDX41-202ENST00000503078 LBHQ53QV2 105 aaPredicted RBP20.58■□□□□ 0.89
DDX41-202ENST00000503078 MDP1Q86V88 176 aa20.58■□□□□ 0.89
DDX41-202ENST00000503078 NPCDR1Q9BY65 106 aa20.58■□□□□ 0.89
DDX41-202ENST00000503078 MRPL37Q9BZE1 423 aaKnown RBP20.58■□□□□ 0.89
DDX41-202ENST00000503078 KCNIP1Q9NZI2 227 aa20.58■□□□□ 0.89
DDX41-202ENST00000503078 IL18BPO95998 194 aa20.58■□□□□ 0.88
DDX41-202ENST00000503078 TYMSP04818 313 aa20.58■□□□□ 0.88
DDX41-202ENST00000503078 DEFB123Q8N688 67 aa20.58■□□□□ 0.88
DDX41-202ENST00000503078 DTD1Q8TEA8 209 aa20.58■□□□□ 0.88
DDX41-202ENST00000503078 TMEM37Q8WXS4 190 aa20.58■□□□□ 0.88
DDX41-202ENST00000503078 FUT9Q9Y231 359 aa20.58■□□□□ 0.88
DDX41-202ENST00000503078 FRYLO94915 3013 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 CER1O95813 267 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 RAC2P15153 192 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 ZXDAP98168 799 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 ACOT6Q3I5F7 207 aaPredicted RBP20.57■□□□□ 0.88
DDX41-202ENST00000503078 ABHD17BQ5VST6 288 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 ZNF709Q8N972 641 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 NANOS1Q8WY41 292 aaKnown RBP20.57■□□□□ 0.88
DDX41-202ENST00000503078 C2orf88Q9BSF0 95 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 OR6C3Q9NZP0 311 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 CDIPTO14735 213 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 ZG16O60844 167 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 PMP22Q01453 160 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 EIF4EBP1Q13541 118 aaPredicted RBP20.57■□□□□ 0.88
DDX41-202ENST00000503078 C3AR1Q16581 482 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 CISD2Q8N5K1 135 aaKnown RBP20.57■□□□□ 0.88
DDX41-202ENST00000503078 TMEM251Q8N6I4 163 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 OR1L1Q8NH94 360 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 BCL2L2Q92843 193 aaPredicted RBP20.57■□□□□ 0.88
DDX41-202ENST00000503078 C5orf30Q96GV9 206 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 C12orf49Q9H741 205 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 LOXL2Q9Y4K0 774 aa20.57■□□□□ 0.88
DDX41-202ENST00000503078 ARHGAP21Q5T5U3 1957 aa20.56■□□□□ 0.88
DDX41-202ENST00000503078 S1PR2O95136 353 aa20.56■□□□□ 0.88
DDX41-202ENST00000503078 CATR1Q13166 79 aa20.56■□□□□ 0.88
DDX41-202ENST00000503078 VWC2Q2TAL6 325 aa20.56■□□□□ 0.88
DDX41-202ENST00000503078 ZNF808Q8N4W9 903 aaPredicted RBP20.56■□□□□ 0.88
DDX41-202ENST00000503078 GALMQ96C23 342 aa20.56■□□□□ 0.88
DDX41-202ENST00000503078 ZNF705GA8MUZ8 300 aaPredicted RBP20.56■□□□□ 0.88
DDX41-202ENST00000503078 NDUFB7P17568 137 aa20.56■□□□□ 0.88
DDX41-202ENST00000503078 OR3A1P47881 315 aa20.56■□□□□ 0.88
DDX41-202ENST00000503078 OR1C1Q15619 314 aa20.56■□□□□ 0.88
DDX41-202ENST00000503078 CIB3Q96Q77 187 aaPredicted RBP20.56■□□□□ 0.88
DDX41-202ENST00000503078 FREM2Q5SZK8 3169 aa20.55■□□□□ 0.88
DDX41-202ENST00000503078 KCNIP4Q6PIL6 250 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms