RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 MOB1BQ7L9L4 216 aa11.2□□□□□ -0.62
PCCB-219ENST00000494742 ZFP41Q8N8Y5 198 aa11.2□□□□□ -0.62
PCCB-219ENST00000494742 EDARADDQ8WWZ3 215 aa11.2□□□□□ -0.62
PCCB-219ENST00000494742 FAM46BQ96A09 425 aa11.2□□□□□ -0.62
PCCB-219ENST00000494742 TSNAXQ99598 290 aaKnown RBP11.2□□□□□ -0.62
PCCB-219ENST00000494742 AGMATQ9BSE5 352 aa11.2□□□□□ -0.62
PCCB-219ENST00000494742 FAAP24Q9BTP7 215 aa11.2□□□□□ -0.62
PCCB-219ENST00000494742 RSRP1Q9BUV0 290 aa11.2□□□□□ -0.62
PCCB-219ENST00000494742 RIMS4Q9H426 269 aaPredicted RBP11.2□□□□□ -0.62
PCCB-219ENST00000494742 METTL1Q9UBP6 276 aaKnown RBP11.2□□□□□ -0.62
PCCB-219ENST00000494742 GAB2Q9UQC2 676 aa11.2□□□□□ -0.62
PCCB-219ENST00000494742 SACSQ9NZJ4 4579 aa11.19□□□□□ -0.62
PCCB-219ENST00000494742 DNAH1Q9P2D7 4330 aa11.19□□□□□ -0.62
PCCB-219ENST00000494742 BRI3O95415 125 aa11.19□□□□□ -0.62
PCCB-219ENST00000494742 RPS27AP62979 156 aaKnown RBP11.19□□□□□ -0.62
PCCB-219ENST00000494742 KLF5Q13887 457 aaPredicted RBP11.19□□□□□ -0.62
PCCB-219ENST00000494742 PSG5Q15238 335 aa11.19□□□□□ -0.62
PCCB-219ENST00000494742 GLDNQ6ZMI3 551 aaPredicted RBP11.19□□□□□ -0.62
PCCB-219ENST00000494742 FAM103A1Q9BTL3 118 aaKnown RBP11.19□□□□□ -0.62
PCCB-219ENST00000494742 MGAT4AQ9UM21 535 aa11.19□□□□□ -0.62
PCCB-219ENST00000494742 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 C13orf42A0A1B0GVH6 325 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 EFCAB10A6NFE3 127 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 CA2P00918 260 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 ARSBP15848 533 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 ZBTB25P24278 435 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 HAGHQ16775 308 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 OGFRL1Q5TC84 451 aaPredicted RBP11.18□□□□□ -0.62
PCCB-219ENST00000494742 C6orf201Q7Z4U5 140 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 HAPLN4Q86UW8 402 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 POC5Q8NA72 575 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 OR9G4Q8NGQ1 327 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 IL17DQ8TAD2 202 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 KCNG3Q8TAE7 436 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 PTX4Q96A99 478 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 ABHD14BQ96IU4 210 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 CYYR1Q96J86 154 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 TMEM68Q96MH6 324 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 TM2D1Q9BX74 207 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 TMEM59Q9BXS4 323 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 SIGLEC8Q9NYZ4 499 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 BIRC6Q9NR09 4857 aa11.18□□□□□ -0.62
PCCB-219ENST00000494742 CPEP16870 476 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 CELP19835 753 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 ST3GAL4Q11206 333 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 FXYD3Q14802 87 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 C1orf100Q5SVJ3 147 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 TTC23Q5W5X9 447 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 GTSCR1Q86UQ5 136 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 PDPNQ86YL7 162 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 SETD9Q8NE22 299 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 PHYHIPQ92561 330 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 CLCC1Q96S66 551 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 CHMP1AQ9HD42 196 aaPredicted RBP11.17□□□□□ -0.62
PCCB-219ENST00000494742 ZNF355PQ9NSJ1 428 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 STARD9Q9P2P6 4700 aa11.17□□□□□ -0.62
PCCB-219ENST00000494742 PNMA8CA0A1B0GUJ8 204 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 JTBO76095 146 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 IGKV1-16P04430 117 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 AADACP22760 399 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 HTR2CP28335 458 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 WNT4P56705 351 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 RPS16P62249 146 aaKnown RBP11.16□□□□□ -0.62
PCCB-219ENST00000494742 TATDN3Q17R31 274 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 GLT8D1Q68CQ7 371 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 LCN12Q6JVE5 192 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 IL34Q6ZMJ4 242 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 ADAMTSL5Q6ZMM2 481 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 GGHQ92820 318 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 THAP7Q9BT49 309 aaPredicted RBP11.16□□□□□ -0.62
PCCB-219ENST00000494742 C11orf54Q9H0W9 315 aaPredicted RBP11.16□□□□□ -0.62
PCCB-219ENST00000494742 PLEKHJ1Q9NW61 149 aa11.16□□□□□ -0.62
PCCB-219ENST00000494742 PROP1O75360 226 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 BPNT1O95861 308 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 APOA2P02652 100 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 CEACAM6P40199 344 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 OR10K2Q6IF99 312 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 Q8N402 240 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 MS4A15Q8N5U1 240 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 GRPEL2Q8TAA5 225 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 SETD6Q8TBK2 473 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 PARP12Q9H0J9 701 aaKnown RBP11.15□□□□□ -0.62
PCCB-219ENST00000494742 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 ZNF221Q9UK13 617 aa11.15□□□□□ -0.62
PCCB-219ENST00000494742 TMEM14DPA8MWL7 114 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 MYL12BO14950 172 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 SLC25A17O43808 307 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 CNIH1O95406 144 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 CD37P11049 281 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 LGALS7P47929 136 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 HLA-DRB3P79483 266 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 QRFPP83859 136 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 UNC119Q13432 240 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 ZNF343Q6P1L6 599 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 IZUMO2Q6UXV1 221 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 ZNF383Q8NA42 475 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 DRAXINQ8NBI3 349 aaPredicted RBP11.14□□□□□ -0.63
PCCB-219ENST00000494742 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.14□□□□□ -0.63
PCCB-219ENST00000494742 OR5T1Q8NG75 326 aa11.14□□□□□ -0.63
PCCB-219ENST00000494742 OR2K2Q8NGT1 345 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms