RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 KLHL30-AS1Q8NEE0 82 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 OR2AK2Q8NG84 335 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 OR5AN1Q8NGI8 311 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 ISOC1Q96CN7 298 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 RNF5Q99942 180 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 URM1Q9BTM9 101 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 TOLLIPQ9H0E2 274 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 PARP12Q9H0J9 701 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 RBM38Q9H0Z9 239 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 OR51E2Q9H255 320 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 Q9N2K0 584 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 PLEKHJ1Q9NW61 149 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 TXNL4BQ9NX01 149 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 PIPOXQ9P0Z9 390 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 ABRACLQ9P1F3 81 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 AK3Q9UIJ7 227 aa7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 AK6Q9Y3D8 172 aaKnown RBP7.59□□□□□ -1.19
TMEM39A-210ENST00000490099 TRAV1-2A0A0B4J238 106 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 H3BMQ9 156 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 PDCD5O14737 125 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 ARSBP15848 533 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 CNTFRP26992 372 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 RANBP1P43487 201 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 P2RY14Q15391 338 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 MMDQ15546 238 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 RAB11BQ15907 218 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 CTF1Q16619 201 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 C2orf76Q3KRA6 126 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 PLAC9Q5JTB6 97 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 C22orf42Q6IC83 251 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 LCNL1Q6ZST4 164 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 C4orf3Q8WVX3 66 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 FAM3DQ96BQ1 224 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 UBE2E2Q96LR5 201 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 C11orf54Q9H0W9 315 aaPredicted RBP7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 KLK15Q9H2R5 256 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 OR51J1Q9H342 316 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 STEAP1Q9UHE8 339 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 MGAT4AQ9UM21 535 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 KCNK7Q9Y2U2 307 aa7.58□□□□□ -1.2
TMEM39A-210ENST00000490099 IGKV1-6A0A0C4DH72 117 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 SHISA3A0PJX4 238 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 OR5H14A6NHG9 310 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 NUDT19A8MXV4 375 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 G3V318 75 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 H0YJW9 148 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 NBR2O15453 112 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 SCTP09683 121 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 EGR2P11161 476 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 VDAC1P21796 283 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 CALRP27797 417 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 HOXD3P31249 432 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 MC5RP33032 325 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 LSM3P62310 102 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 ZNF660Q6AZW8 331 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 LIN54Q6MZP7 749 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 TPRA1Q86W33 373 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 ZNF491Q8N8L2 437 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 OR8U1Q8NH10 309 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 ARHGAP5-AS1Q96IT6 56 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 HDHD3Q9BSH5 251 aaPredicted RBP7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 CENPOQ9BU64 300 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 PECRQ9BY49 303 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 PLGRKTQ9HBL7 147 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 C12orf4Q9NQ89 552 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 ZMAT5Q9UDW3 170 aaKnown RBP7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 GAB2Q9UQC2 676 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 NUBP2Q9Y5Y2 271 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 V9GY05 133 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 COL7A1Q02388 2944 aa7.57□□□□□ -1.2
TMEM39A-210ENST00000490099 I3L521 148 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 RAB27BO00194 218 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 FCN1O00602 326 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 RRHO14718 337 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 ATP6V0E1O15342 81 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 SOX15O60248 233 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 TMEM127O75204 238 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 RBBP9O75884 186 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 DIRAS3O95661 229 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 SLC2A2P11168 524 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 ZBTB25P24278 435 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 CEACAM6P40199 344 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 SERPINB10P48595 397 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 LUMP51884 338 aaPredicted RBP7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 CLDN12P56749 244 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 VBP1P61758 197 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 NCS1P62166 190 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 CX3CL1P78423 397 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 HLA-DRB3P79483 266 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 PLA2G7Q13093 441 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 RPL39P5Q59GN2 51 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 ASPHD1Q5U4P2 390 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 CROCCP3Q8IVE0 287 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 IL1F10Q8WWZ1 152 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 ABHD14BQ96IU4 210 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 DUX3Q96PT4 197 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 NAA50Q9GZZ1 169 aaKnown RBP7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 DCSTAMPQ9H295 470 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 TPSG1Q9NRR2 321 aa7.56□□□□□ -1.2
TMEM39A-210ENST00000490099 OR1A1Q9P1Q5 309 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms