RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 GNA12Q03113 381 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 EMX1Q04741 257 aaPredicted RBP0.05□□□□□ -2.4
CCDC93-209ENST00000488908 CD164Q04900 197 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 TBC1D28Q2M2D7 210 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 TRMT12Q53H54 448 aaKnown RBP0.05□□□□□ -2.4
CCDC93-209ENST00000488908 CENPWQ5EE01 88 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 SPATA8Q6RVD6 105 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 LYZL1Q6UWQ5 148 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 C7orf65Q6ZTY9 151 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 DOLPP1Q86YN1 238 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 DYNAPQ8N1N2 210 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 OR2D3Q8NGH3 330 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 OR51H1Q8NH63 302 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 CLDND2Q8NHS1 167 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 LGALS14Q8TCE9 139 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 SMCR5Q8TEV8 140 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 CYGBQ8WWM9 190 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 RMND1Q9NWS8 449 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 RAB3GAP2Q9H2M9 1393 aa0.05□□□□□ -2.4
CCDC93-209ENST00000488908 APCP25054 2843 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 hCG_2039718K7EN88 272 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 TXNDC9O14530 226 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 SC5DO75845 299 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 MT-CO2P00403 227 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 IGLV3-27P01718 113 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 CRYGCP07315 174 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 CRYBB3P26998 211 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 IFNGR2P38484 337 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 STC1P52823 247 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 VAMP3Q15836 100 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 MOGQ16653 247 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 LGALS9BQ3B8N2 356 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 DRAM2Q6UX65 266 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 SCGB1D4Q6XE38 83 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 Q6ZT83 130 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 SLC36A1Q7Z2H8 476 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 C15orf53Q8NAA6 179 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 ZNF439Q8NDP4 499 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 CCDC112Q8NEF3 446 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 OR52K2Q8NGK3 314 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 OR4A15Q8NGL6 344 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 IFT81Q8WYA0 676 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 TOP1MTQ969P6 601 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 KIAA1143Q96AT1 154 aaPredicted RBP0.04□□□□□ -2.4
CCDC93-209ENST00000488908 ZNF707Q96C28 371 aaPredicted RBP0.04□□□□□ -2.4
CCDC93-209ENST00000488908 MRAP2Q96G30 205 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 MED28Q9H204 178 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 FBXO44Q9H4M3 255 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 TMBIM4Q9HC24 238 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 TAS2R13Q9NYV9 303 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 COMMD9Q9P000 198 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 TAAR3PQ9P1P4 343 aa0.04□□□□□ -2.4
CCDC93-209ENST00000488908 ZFC3H1O60293 1989 aaKnown RBP0.04□□□□□ -2.4
CCDC93-209ENST00000488908 LAMA4Q16363 1823 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 DSCAMO60469 2012 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 IGKV1D-42A0A075B6H8 117 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 POLR3GO15318 223 aaPredicted RBP0.03□□□□□ -2.4
CCDC93-209ENST00000488908 SHOX2O60902 331 aaPredicted RBP0.03□□□□□ -2.4
CCDC93-209ENST00000488908 CRYBA1P05813 215 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 OR13C7P0DN81 318 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 PSMB8P28062 276 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 RPL27AP46776 148 aaKnown RBP0.03□□□□□ -2.4
CCDC93-209ENST00000488908 RBM11P57052 281 aaKnown RBP0.03□□□□□ -2.4
CCDC93-209ENST00000488908 PLPPR5Q32ZL2 321 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 ARHGAP11BQ3KRB8 267 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 TTC33Q6PID6 262 aaPredicted RBP0.03□□□□□ -2.4
CCDC93-209ENST00000488908 ZNF705AQ6ZN79 300 aaPredicted RBP0.03□□□□□ -2.4
CCDC93-209ENST00000488908 MRPL52Q86TS9 123 aaKnown RBP0.03□□□□□ -2.4
CCDC93-209ENST00000488908 PLCZ1Q86YW0 608 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 C12orf29Q8N999 325 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 OR51T1Q8NGJ9 327 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 TMA16Q96EY4 203 aaKnown RBP0.03□□□□□ -2.4
CCDC93-209ENST00000488908 TMEM222Q9H0R3 208 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 NCOR1P1Q9H4R4 102 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 SLC2A9Q9NRM0 540 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 UBQLN4Q9NRR5 601 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 MS4A12Q9NXJ0 267 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 STMN3Q9NZ72 180 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 PSME2Q9UL46 239 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 TIMM9Q9Y5J7 89 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 SNX10Q9Y5X0 201 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 FAT4Q6V0I7 4981 aa0.03□□□□□ -2.4
CCDC93-209ENST00000488908 DNMT1P26358 1616 aaKnown RBP0.02□□□□□ -2.41
CCDC93-209ENST00000488908 IGHV1-18A0A0C4DH31 117 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 GOLGA6L7A0A1B0GV03 622 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 GOLGA6L10A6NI86 522 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 EFCAB9A8MZ26 197 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 M0QYV0 167 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 GSTZ1O43708 216 aaPredicted RBP0.02□□□□□ -2.41
CCDC93-209ENST00000488908 ORC5O43913 435 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 STAG3L2P0CL84 134 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 CCR2P41597 374 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 CA7P43166 264 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 HIST1H4AP62805 103 aaKnown RBP0.02□□□□□ -2.41
CCDC93-209ENST00000488908 BTN3A2P78410 334 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 CDK10Q15131 360 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 BSXQ3C1V8 233 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.02□□□□□ -2.41
CCDC93-209ENST00000488908 TMEM86AQ8N2M4 240 aa0.02□□□□□ -2.41
CCDC93-209ENST00000488908 TMEM75Q8N9X5 138 aa0.02□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms