RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OR2Y1Q8NGV0 311 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 OR1L1Q8NH94 360 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 TBX15Q96SF7 602 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 ZNF391Q9UJN7 358 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 LRP5LA4QPB2 252 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 ZNF716A6NP11 495 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 ST8SIA5O15466 376 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 GZMHP20718 246 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 MAGEA5P43359 124 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 CDC34P49427 236 aaPredicted RBP10.79□□□□□ -0.68
VPS52-218ENST00000482399 KRTDAPP60985 99 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 ACSM6Q6P461 480 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 B4GALT7Q9UBV7 327 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 BOKQ9UMX3 212 aaPredicted RBP10.79□□□□□ -0.68
VPS52-218ENST00000482399 PSG11Q9UQ72 335 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 RIF1Q5UIP0 2472 aaKnown RBP10.79□□□□□ -0.68
VPS52-218ENST00000482399 IGKV1D-33P01593 117 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 IGKV1-33P01594 117 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 IGKV1-5P01602 117 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 UBE2NP61088 152 aaKnown RBP10.79□□□□□ -0.68
VPS52-218ENST00000482399 ALKBH6Q3KRA9 238 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 DRAM1Q8N682 238 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 CNEP1R1Q8N9A8 125 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 DTD1Q8TEA8 209 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 KCNE4Q8WWG9 221 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 DERL1Q9BUN8 251 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 PARD6AQ9NPB6 346 aa10.79□□□□□ -0.68
VPS52-218ENST00000482399 MED12LQ86YW9 2145 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 TRAV24A0A0B4J272 114 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 TGOLN2O43493 480 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 KBTBD11O94819 623 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 FABP6P51161 128 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 CNN1P51911 297 aaKnown RBP10.78□□□□□ -0.68
VPS52-218ENST00000482399 TCL1AP56279 114 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 CD81P60033 236 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 CATR1Q13166 79 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 NUFIP2Q7Z417 695 aaKnown RBP10.78□□□□□ -0.68
VPS52-218ENST00000482399 VKORC1L1Q8N0U8 176 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 TMEM256Q8N2U0 113 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 CTDSP1Q9GZU7 261 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 PLSCR2Q9NRY7 297 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 DEPPQ9NTK1 212 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 RNF115Q9Y4L5 304 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 PINLYPA6NC86 204 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 OR2H2O95918 312 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 HRASP01112 189 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 C1QTNF9P0C862 333 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 ATP5G3P48201 142 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 NUBP1P53384 320 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 SERF2P84101 59 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 JOSD1Q15040 202 aaPredicted RBP10.78□□□□□ -0.68
VPS52-218ENST00000482399 PRAMEF5Q5TYX0 476 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 PRAMEF6Q5VXH4 476 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 MRPL14Q6P1L8 145 aaKnown RBP10.78□□□□□ -0.68
VPS52-218ENST00000482399 DPPA3Q6W0C5 159 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 VN1R17PQ8TDU5 208 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 RIMS4Q9H426 269 aaPredicted RBP10.78□□□□□ -0.68
VPS52-218ENST00000482399 DCAF16Q9NXF7 216 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 F6UZH7 168 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 S1PR2O95136 353 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 NAPSAO96009 420 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 LRRC75BQ2VPJ9 315 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 ODF3L1Q8IXM7 274 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 SPEM1Q8N4L4 309 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 PLPPR1Q8TBJ4 325 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 GALMQ96C23 342 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 OR2J1Q9GZK6 312 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 PROK2Q9HC23 129 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 SIT1Q9Y3P8 196 aa10.78□□□□□ -0.68
VPS52-218ENST00000482399 A0A1B0GW64 132 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 A6NNC1 897 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 FCGR3BO75015 233 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 NTF3P20783 257 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 HTD2P86397 168 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 CACNA1HO95180 2353 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 CTXND1A0A1B0GTU2 59 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 ETV2O00321 342 aaPredicted RBP10.77□□□□□ -0.69
VPS52-218ENST00000482399 WNT9BO14905 357 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 FGF5P12034 268 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 TNFRSF9Q07011 255 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 TRIM61Q5EBN2 209 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 TMEM42Q69YG0 159 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 CYP2G1PQ6ZSU1 146 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 OR5A2Q8NGI9 324 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 BTF3L4Q96K17 158 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 IMMP1LQ96LU5 166 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 RBM14Q96PK6 669 aaKnown RBP10.77□□□□□ -0.69
VPS52-218ENST00000482399 TECTBQ96PL2 329 aa10.77□□□□□ -0.69
VPS52-218ENST00000482399 REPIN1Q9BWE0 567 aaKnown RBP10.77□□□□□ -0.69
VPS52-218ENST00000482399 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.77□□□□□ -0.69
VPS52-218ENST00000482399 SH2D1BO14796 132 aa10.76□□□□□ -0.69
VPS52-218ENST00000482399 KLF7O75840 302 aaPredicted RBP10.76□□□□□ -0.69
VPS52-218ENST00000482399 LYZL6O75951 148 aa10.76□□□□□ -0.69
VPS52-218ENST00000482399 MT-CO3P00414 261 aa10.76□□□□□ -0.69
VPS52-218ENST00000482399 IGKV1-39P01597 117 aa10.76□□□□□ -0.69
VPS52-218ENST00000482399 IGKV1D-39P04432 117 aa10.76□□□□□ -0.69
VPS52-218ENST00000482399 CBLN1P23435 193 aa10.76□□□□□ -0.69
VPS52-218ENST00000482399 KIAA1644Q3SXP7 199 aa10.76□□□□□ -0.69
VPS52-218ENST00000482399 GGNQ86UU5 652 aa10.76□□□□□ -0.69
VPS52-218ENST00000482399 HAPLN4Q86UW8 402 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms