RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 CXCL17Q6UXB2 119 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 PAMR1Q6UXH9 720 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 CLEC19AQ6UXS0 136 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 Q6ZRP5 223 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 TMEM252Q8N6L7 170 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 C4orf32Q8N8J7 132 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 OR2M7Q8NG81 312 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 OR10AD1Q8NGE0 317 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 OR51A2Q8NGJ7 313 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 OR4S2Q8NH73 311 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 NPRL2Q8WTW4 380 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 C1orf54Q8WWF1 131 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 TMEM158Q8WZ71 300 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 PYURFQ96I23 114 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 PRAC1Q96KF2 57 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 OR2A7Q96R45 310 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 PFDN5Q99471 154 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 SYT15Q9BQS2 421 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 MARVELD1Q9BSK0 173 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 C19orf24Q9BVV8 132 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 SLC17A9Q9BYT1 436 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 ULBP3Q9BZM4 244 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 EIF5A2Q9GZV4 153 aaKnown RBP2.23□□□□□ -2.05
HMGN4-202ENST00000477243 DEFB127Q9H1M4 99 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 DDX31Q9H8H2 851 aaKnown RBP2.23□□□□□ -2.05
HMGN4-202ENST00000477243 ZDHHC11Q9H8X9 412 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 SLC25A22Q9H936 323 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 HES4Q9HCC6 221 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 SH2D2AQ9NP31 389 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 CISHQ9NSE2 258 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 AIG1Q9NVV5 245 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 MARCH5Q9NX47 278 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 RSL24D1Q9UHA3 163 aaKnown RBP2.23□□□□□ -2.05
HMGN4-202ENST00000477243 UTP11Q9Y3A2 253 aaKnown RBP2.23□□□□□ -2.05
HMGN4-202ENST00000477243 HEBP2Q9Y5Z4 205 aa2.23□□□□□ -2.05
HMGN4-202ENST00000477243 SHANK1Q9Y566 2161 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 PLXNB2O15031 1838 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 COL11A1P12107 1806 aaPredicted RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 OTOFQ9HC10 1997 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 A0A1B0GXF2 115 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 GMNCA6NCL1 334 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 RPL37AP8A6NKH3 93 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 CD300LBA8K4G0 201 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 EEF1E1-BLOC1S5C9J1V9 151 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 EEF1E1O43324 174 aaKnown RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 EDIL3O43854 480 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SNAP91O60641 907 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 MMP23AO75900 390 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 ZFAND5O76080 213 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 GADD45GO95257 159 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 GPR75O95800 540 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 TRBV12-3P01733 135 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 IGHG2P01859 326 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 HBZP02008 142 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 APOA2P02652 100 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 ZNF20P17024 532 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 PRTN3P24158 256 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 COX7A1P24310 79 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 MARK3P27448 753 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SDC4P31431 198 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 BTCP35070 178 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SLC25A1P53007 311 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SYNJ2BPP57105 145 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 DSCR9P59020 149 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 TAS2R46P59540 309 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 PMAIP1Q13794 54 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 KIAA0087Q14695 138 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 HERPUD1Q15011 391 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SURF2Q15527 256 aaPredicted RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 GSG1Q2KHT4 349 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 IAH1Q2TAA2 248 aaPredicted RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 PRR30Q53SZ7 412 aaPredicted RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 TMEM128Q5BJH2 165 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 TCTEX1D4Q5JR98 221 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SLC25A30Q5SVS4 291 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 AKR1C8PQ5T2L2 129 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 C9orf64Q5T6V5 341 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 TMEM78Q5T7P6 136 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 STPG1Q5TH74 334 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 FAM53AQ6NSI3 398 aaPredicted RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 NANOGP8Q6NSW7 305 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 LPCAT3Q6P1A2 487 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 C2orf66Q6UXQ4 117 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 TMPPEQ6ZT21 453 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 ZNF627Q7L945 461 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 ZNF550Q7Z398 422 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 NEGR1Q7Z3B1 354 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 ZNF575Q86XF7 245 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 C20orf196Q8IYI0 205 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 EIF4E3Q8N5X7 224 aaKnown RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 OR52L1Q8NGH7 329 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 OR8S1Q8NH09 359 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 OR5K1Q8NHB7 308 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 ZNRF2Q8NHG8 242 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 GRPEL2Q8TAA5 225 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 GNPDA2Q8TDQ7 276 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 DCAKDQ8WVC6 231 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 FAM151AQ8WW52 585 aa2.22□□□□□ -2.05
HMGN4-202ENST00000477243 SRSF12Q8WXF0 261 aaKnown RBP2.22□□□□□ -2.05
HMGN4-202ENST00000477243 TCEAL3Q969E4 200 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms