RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 FAM90A20PA6NIJ5 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A8PA6NJQ4 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A7PA6NKC0 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A22PA8MWA6 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A12PA8MX19 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A5PA8MXJ8 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A23PA8MXZ1 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 K7EP13 123 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 NAPSAO96009 420 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A15PP0C7V4 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A13PP0C7W8 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A14PP0C7W9 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 FAM90A24PP0C7X0 464 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 KIR2DS4P43632 304 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 TLE1Q04724 770 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 KIR2DS1Q14954 304 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 MSMO1Q15800 293 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 RNF138Q8WVD3 245 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 TMEM54Q969K7 222 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 SLC25A22Q9H936 323 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 PATZ1Q9HBE1 687 aaKnown RBP12.34□□□□□ -0.43
SAMM50-203ENST00000474323 PLA2G3Q9NZ20 509 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 KLRF1Q9NZS2 232 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 TP53TG3Q9ULZ0 132 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 CD300LBA8K4G0 201 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 NTN3O00634 580 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-203ENST00000474323 SLC25A17O43808 307 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 CRYGSP22914 178 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 CDKN1AP38936 164 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 DAZAP2Q15038 168 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-203ENST00000474323 MMDQ15546 238 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 OR5T1Q8NG75 326 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 GATAD1Q8WUU5 269 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 STRADBQ9C0K7 418 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 AKIRIN1Q9H9L7 192 aaPredicted RBP12.34□□□□□ -0.43
SAMM50-203ENST00000474323 CACNG5Q9UF02 275 aa12.34□□□□□ -0.43
SAMM50-203ENST00000474323 IGLV3-32A0A0A0MS00 114 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 UBE2L5PA0A1B0GUS4 154 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 HMGB3O15347 200 aaKnown RBP12.33□□□□□ -0.44
SAMM50-203ENST00000474323 CCL25O15444 150 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 GALR2O43603 387 aaPredicted RBP12.33□□□□□ -0.44
SAMM50-203ENST00000474323 PAGE4O60829 102 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 WNT2P09544 360 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 PHYHD1Q5SRE7 291 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 SGMS2Q8NHU3 365 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 ZDHHC11Q9H8X9 412 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 IGLV3-12A0A075B6K2 115 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 GRIFINA4D1Z8 144 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 DHHO43323 396 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 MMP23AO75900 390 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 NDUFB8O95169 186 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 KRASP01116 189 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 CCL4P13236 92 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 BMI1P35226 326 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 COMPP49747 757 aaPredicted RBP12.33□□□□□ -0.44
SAMM50-203ENST00000474323 LHX2P50458 406 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 LINC00310P59036 64 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 SLC38A11Q08AI6 406 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 ACSM6Q6P461 480 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 OR10G9Q8NGN4 311 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 OR10G7Q8NGN6 311 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 RBM24Q9BX46 236 aaKnown RBP12.33□□□□□ -0.44
SAMM50-203ENST00000474323 ZNF391Q9UJN7 358 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 MSRB2Q9Y3D2 182 aa12.33□□□□□ -0.44
SAMM50-203ENST00000474323 PDE6DO43924 150 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 PSG2P11465 335 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 CRISP2P16562 243 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 NPPCP23582 126 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 FKBP2P26885 142 aaKnown RBP12.32□□□□□ -0.44
SAMM50-203ENST00000474323 HTD2P86397 168 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 IZUMO4Q1ZYL8 232 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 SPANXN5Q5MJ07 72 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 FAM69BQ5VUD6 431 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 EXPH5Q8NEV8 1989 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 OR10V1Q8NGI7 309 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 THAP3Q8WTV1 239 aaPredicted RBP12.32□□□□□ -0.44
SAMM50-203ENST00000474323 RNF2Q99496 336 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 UQCR10Q9UDW1 63 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 ATP23Q9Y6H3 246 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 C1QTNF9BB2RNN3 333 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 C11orf94C9JXX5 98 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 SERF1AO75920 110 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 OR5G3P0C626 314 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 CLDN15P56746 228 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 RIPPLY2Q5TAB7 128 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 TCF23Q7RTU1 214 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 STPG4Q8N801 248 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 CPEB3Q8NE35 698 aaKnown RBP12.32□□□□□ -0.44
SAMM50-203ENST00000474323 OR5P3Q8WZ94 311 aa12.32□□□□□ -0.44
SAMM50-203ENST00000474323 IGKV1-6A0A0C4DH72 117 aa12.31□□□□□ -0.44
SAMM50-203ENST00000474323 CTRLP40313 264 aa12.31□□□□□ -0.44
SAMM50-203ENST00000474323 FAM27BQ5VT28 67 aa12.31□□□□□ -0.44
SAMM50-203ENST00000474323 ANKRD37Q7Z713 158 aa12.31□□□□□ -0.44
SAMM50-203ENST00000474323 OR51H1Q8NH63 302 aa12.31□□□□□ -0.44
SAMM50-203ENST00000474323 SFRP2Q96HF1 295 aa12.31□□□□□ -0.44
SAMM50-203ENST00000474323 EP300Q09472 2414 aaPredicted RBP12.31□□□□□ -0.44
SAMM50-203ENST00000474323 TRAV9-1A0A075B6T8 112 aa12.3□□□□□ -0.44
SAMM50-203ENST00000474323 LRP5LA4QPB2 252 aa12.3□□□□□ -0.44
SAMM50-203ENST00000474323 CBR3O75828 277 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms