RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FADS2O95864 444 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 CA2P00918 260 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 MAS1P04201 325 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 CD2P06729 351 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 CD7P09564 240 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 CT45A6P0DMU7 189 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 CT45A5P0DMU8 189 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 CT45A7P0DMV0 189 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 FASP25445 335 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 BDKRB2P30411 391 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 MECP2P51608 486 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 SNRPGP62308 76 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 PPP3R1P63098 170 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 SSBP2P81877 361 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 HTD2P86397 168 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 MRPL28Q13084 256 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 DYRK1AQ13627 763 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 PMS2P11Q13670 270 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 DNAL1Q4LDG9 190 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 RPL39P5Q59GN2 51 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 LY6G6FQ5SQ64 297 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 C6orf141Q5SZD1 244 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 DMKNQ6E0U4 476 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 SIGIRRQ6IA17 410 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 GLDNQ6ZMI3 551 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 AMIGO2Q86SJ2 522 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 LAX1Q8IWV1 398 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 RPP25LQ8N5L8 163 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 DEFB125Q8N687 156 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 OR2AK2Q8NG84 335 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 GRPEL2Q8TAA5 225 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 MRPL30Q8TCC3 161 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 GPR148Q8TDV2 347 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 MRPS24Q96EL2 167 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 YPEL2Q96QA6 119 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 CLCC1Q96S66 551 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 S100A13Q99584 98 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF184Q99676 751 aaPredicted RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 NEURL2Q9BR09 285 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 METTL1Q9UBP6 276 aaKnown RBP3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 OAZ3Q9UMX2 235 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 PEX16Q9Y5Y5 336 aa3.87□□□□□ -1.79
SNRNP40-204ENST00000474025 UBE2QL1A1L167 161 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 CXorf65A6NEN9 183 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 NUPR2A6NF83 97 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 FAM90A7PA6NKC0 464 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF785A8K8V0 405 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 FAM90A23PA8MXZ1 464 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 OR11H12B2RN74 326 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 H7C2Y5 167 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 RAB29O14966 203 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 SLC22A1O15245 554 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 GYG2O15488 501 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 RBMXL2O75526 392 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 RBBP9O75884 186 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 OR2A4O95047 310 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 SPDEFO95238 335 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 CNIH1O95406 144 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 IGKV1-16P04430 117 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 GLAP06280 429 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 MED14OSP0DP75 135 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 FUT3P21217 361 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 GTF2A1P52655 376 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 GBX2P52951 348 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 DEFA5Q01523 94 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 EWSR1Q01844 656 aaKnown RBP eCLIP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 RIPK1Q13546 671 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 GPR176Q14439 515 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 PSG5Q15238 335 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 HMGN3Q15651 99 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 CD300EQ496F6 205 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 MEDAGQ5VYS4 303 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 XAF1Q6GPH4 301 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF343Q6P1L6 599 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 OR5T1Q8NG75 326 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 OR5AN1Q8NGI8 311 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 OR2K2Q8NGT1 345 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 GHSRQ92847 366 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 GALMQ96C23 342 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 ORAI1Q96D31 301 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 Q96M66 194 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 OR14A2Q96R54 314 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 MYCBPQ99417 103 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 RNF5Q99942 180 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 OVOL2Q9BRP0 275 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 PARP12Q9H0J9 701 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 SRD5A3Q9H8P0 318 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 ZNF355PQ9NSJ1 428 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 ERVK13-1Q9NX77 482 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 SLC2A8Q9NY64 477 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 PIPOXQ9P0Z9 390 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 PEF1Q9UBV8 284 aaKnown RBP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 AASSQ9UDR5 926 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 SLC23A1Q9UHI7 598 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 WASHC3Q9Y3C0 194 aa3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.86□□□□□ -1.79
SNRNP40-204ENST00000474025 TRAV8-7A0A075B6U6 113 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 SAC3D1A6NKF1 404 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 SNTNA6NMZ2 147 aa3.85□□□□□ -1.79
SNRNP40-204ENST00000474025 H3BNX3 289 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms