RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 TFF3Q07654 80 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 KIR2DS1Q14954 304 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 RAET1LQ5VY80 246 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 FGFBP3Q8TAT2 258 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 SAMD10Q9BYL1 202 aa11.66□□□□□ -0.54
NPHP4-207ENST00000470763 LOC102725191A0A1B0GVB3 256 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 HS3ST1O14792 307 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 MLNRO43193 412 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 GNB1P62873 340 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 STPG4Q8N801 248 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 RDH5Q92781 318 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 SLC35E1Q96K37 410 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 TMEM204Q9BSN7 226 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 CRIM1Q9NZV1 1036 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 OR1A1Q9P1Q5 309 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 MRPS17Q9Y2R5 130 aaKnown RBP11.65□□□□□ -0.54
NPHP4-207ENST00000470763 OR2W1Q9Y3N9 320 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 R4GN57 208 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 PIAS2O75928 621 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 GPM6AP51674 278 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 ZIC4Q8N9L1 334 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 OR5AU1Q8NGC0 362 aa11.65□□□□□ -0.54
NPHP4-207ENST00000470763 RBM7Q9Y580 266 aaKnown RBP11.65□□□□□ -0.54
NPHP4-207ENST00000470763 CELSR3Q9NYQ7 3312 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 A0A1W2PPC4 97 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 AQP7O14520 342 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 GFRA3O60609 400 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 THBS3P49746 956 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 KRTDAPP60985 99 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 PSG4Q00888 419 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 COTL1Q14019 142 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 Q6ZS49 121 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 RNF138Q8WVD3 245 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 WNT5BQ9H1J7 359 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 KCNS2Q9ULS6 477 aa11.65□□□□□ -0.55
NPHP4-207ENST00000470763 TRAV34A0A0B4J273 112 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 SLC25A6P12236 298 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 CRISP2P16562 243 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 COMPP49747 757 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-207ENST00000470763 RANP62826 216 aaKnown RBP11.64□□□□□ -0.55
NPHP4-207ENST00000470763 RBX1P62877 108 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 MSMO1Q15800 293 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 ZNF324BQ6AW86 544 aaPredicted RBP11.64□□□□□ -0.55
NPHP4-207ENST00000470763 BAGE3Q86Y29 109 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 BAGE2Q86Y30 109 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 TUBG2Q9NRH3 451 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 C20orf202A1L168 122 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 TNFSF11O14788 317 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 CCL25O15444 150 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 NTF4P34130 210 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 ZNF488Q96MN9 340 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 OR6C1Q96RD1 312 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 CHRNA10Q9GZZ6 450 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 FREM2Q5SZK8 3169 aa11.64□□□□□ -0.55
NPHP4-207ENST00000470763 IGLV3-32A0A0A0MS00 114 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 WDR1O75083 606 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 NDUFB8O95169 186 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 FRMD6-AS1P0C7T7 363 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 LHX2P50458 406 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 PTTG1IPP53801 180 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 GCSAMLQ5JQS6 135 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 Q6ZS52 159 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 SFRP2Q96HF1 295 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 BTF3L4Q96K17 158 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 FBXL7Q9UJT9 491 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 LNP1A1A4G5 178 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 TDGF1P13385 188 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 CCNOP22674 350 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 PAFAH1B2P68402 229 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 OR1L1Q8NH94 360 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 FGF23Q9GZV9 251 aaPredicted RBP11.63□□□□□ -0.55
NPHP4-207ENST00000470763 MTCH1Q9NZJ7 389 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 CLN8Q9UBY8 286 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 CACNA1DQ01668 2161 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 TRBV20OR9-2A0A075B6H5 130 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 IGHV1OR21-1A0A087WYE8 117 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 LAMTOR5O43504 91 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 OR5G3P0C626 314 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 MRPS21P82921 87 aaKnown RBP11.63□□□□□ -0.55
NPHP4-207ENST00000470763 ZNF585BQ52M93 769 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 ETFRF1Q6IPR1 90 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 PCED1AQ9H1Q7 454 aa11.63□□□□□ -0.55
NPHP4-207ENST00000470763 MDFIC2A0A1B0GVS7 189 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 OR6C6A6NF89 314 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 CTXN2P0C2S0 81 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 COX5AP20674 150 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 CCR5P51681 352 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 CLDN15P56746 228 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 FOXL1Q12952 345 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 OR56B2PQ8NGI1 322 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 C22orf15Q8WYQ4 148 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 LSM10Q969L4 123 aaKnown RBP11.62□□□□□ -0.55
NPHP4-207ENST00000470763 SPACA9Q96E40 222 aaPredicted RBP11.62□□□□□ -0.55
NPHP4-207ENST00000470763 MRPL18Q9H0U6 180 aaKnown RBP11.62□□□□□ -0.55
NPHP4-207ENST00000470763 TIMM9Q9Y5J7 89 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 FREM1Q5H8C1 2179 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 TRAV38-1A0A0B4J264 116 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 SH2D1BO14796 132 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 IGLV2-14P01704 120 aa11.62□□□□□ -0.55
NPHP4-207ENST00000470763 KITLGP21583 273 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms