RNA–Protein interactions for RNA: ENST00000461743.1

VPS52-213, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 3

Gene VPS52, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-213ENST00000461743 OR5H14A6NHG9 310 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 XRCC3O43542 346 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 MOSP00540 346 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 IGKV1D-33P01593 117 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 IGKV1-33P01594 117 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 APOA1P02647 267 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 CTXN2P0C2S0 81 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 CEACAM6P40199 344 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 ETV6P41212 452 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 CBX5P45973 191 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 REG1BP48304 166 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 RORCP51449 518 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 SNX29P2Q8IUI4 249 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 Q8N6K4 173 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 SAMD12Q8N8I0 201 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 OR10J5Q8NHC4 309 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 SGMS2Q8NHU3 365 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 GRPEL2Q8TAA5 225 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 TAF15Q92804 592 aaKnown RBP eCLIP9.47□□□□□ -0.89
VPS52-213ENST00000461743 AGMATQ9BSE5 352 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 SLA2Q9H6Q3 261 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 RDH8Q9NYR8 311 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 OR1A1Q9P1Q5 309 aa9.47□□□□□ -0.89
VPS52-213ENST00000461743 ST8SIA5O15466 376 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 CCNKO75909 580 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 CD24P25063 80 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 VDAC2P45880 294 aaPredicted RBP9.46□□□□□ -0.9
VPS52-213ENST00000461743 ARSJQ5FYB0 599 aaPredicted RBP9.46□□□□□ -0.9
VPS52-213ENST00000461743 NUDCD2Q8WVJ2 157 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 EAF1Q96JC9 268 aaPredicted RBP9.46□□□□□ -0.9
VPS52-213ENST00000461743 NABP2Q9BQ15 211 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 GINS4Q9BRT9 223 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 CCDC32Q9BV29 185 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 MRPL20Q9BYC9 149 aaKnown RBP9.46□□□□□ -0.9
VPS52-213ENST00000461743 C11orf54Q9H0W9 315 aaPredicted RBP9.46□□□□□ -0.9
VPS52-213ENST00000461743 AUNIPQ9H7T9 357 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 VWFP04275 2813 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 FBN3Q75N90 2809 aa9.46□□□□□ -0.9
VPS52-213ENST00000461743 WNK1Q9H4A3 2382 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 TRAV18A0A075B6X5 111 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 FAM25AB3EWG3 89 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 FAM25CB3EWG5 89 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 FAM25GB3EWG6 89 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 BET1O15155 118 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 RBBP9O75884 186 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 GPR12P47775 334 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 CDK10Q15131 360 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 FBLN7Q53RD9 439 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 TMEM69Q5SWH9 247 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 MZT2AQ6P582 158 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 CNIH2Q6PI25 160 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 C5orf24Q7Z6I8 188 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 KLHDC1Q8N7A1 406 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 C5orf56Q8N8D9 126 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 ZNF251Q9BRH9 671 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 SERTAD4Q9NUC0 356 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 LIN7CQ9NUP9 197 aaKnown RBP9.45□□□□□ -0.9
VPS52-213ENST00000461743 ZNF230Q9UIE0 474 aaPredicted RBP9.45□□□□□ -0.9
VPS52-213ENST00000461743 ANXA10Q9UJ72 324 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 GAB2Q9UQC2 676 aa9.45□□□□□ -0.9
VPS52-213ENST00000461743 SSX5O60225 188 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 PEX14O75381 377 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 TPPPO94811 219 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 AMY1AP04745 511 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 AMY2AP04746 511 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 SPNP16150 400 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 MC5RP33032 325 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 S100A5P33763 92 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 SOX6P35712 828 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 OR3A3P47888 321 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 NKX2-5P52952 324 aaPredicted RBP9.44□□□□□ -0.9
VPS52-213ENST00000461743 BLCAPP62952 87 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 TAGLNQ01995 201 aaKnown RBP9.44□□□□□ -0.9
VPS52-213ENST00000461743 ABCA11PQ4W5N1 156 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 IGSF11Q5DX21 431 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 H1FOOQ8IZA3 346 aaPredicted RBP9.44□□□□□ -0.9
VPS52-213ENST00000461743 OR6F1Q8NGZ6 308 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 WIPF2Q8TF74 440 aaPredicted RBP9.44□□□□□ -0.9
VPS52-213ENST00000461743 MAFIPQ8WZ33 124 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 WNT10AQ9GZT5 417 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 PARP12Q9H0J9 701 aaKnown RBP9.44□□□□□ -0.9
VPS52-213ENST00000461743 ELF5Q9UKW6 265 aaPredicted RBP9.44□□□□□ -0.9
VPS52-213ENST00000461743 MGAM2Q2M2H8 2515 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 NBEAL1Q6ZS30 2694 aa9.44□□□□□ -0.9
VPS52-213ENST00000461743 IGHV3-72A0A0B4J1Y9 119 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 KCNAB3O43448 404 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 SLC22A5O76082 557 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 TAS2R20P59543 309 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 ZFP69Q49AA0 526 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 SMUG1Q53HV7 270 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 PRR31Q5SQ13 230 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 HOGA1Q86XE5 327 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 FAM71E2Q8N5Q1 922 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 BEST4Q8NFU0 473 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 OR5AN1Q8NGI8 311 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 SUN5Q8TC36 379 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 ABHD14BQ96IU4 210 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 RNF5Q99942 180 aa9.43□□□□□ -0.9
VPS52-213ENST00000461743 ST6GALNAC5Q9BVH7 336 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms