RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	CD1B	P29016	333 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	SOX6	P35712	828 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	RPL5	P46777	297 aa	Known RBP	10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	MMD	Q15546	238 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	CTF1	Q16619	201 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	FAM131A	Q6UXB0	335 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	ODF3L1	Q8IXM7	274 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	DRAXIN	Q8NBI3	349 aa	Predicted RBP	10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	RASL11B	Q9BPW5	248 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	ZNF251	Q9BRH9	671 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	CABLES2	Q9BTV7	478 aa		10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.1	□□□□□ -0.79
FDPS-204	ENST00000461507	FAM90A9P	A6NNJ1	464 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507		M0R1X1	148 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	RGS5	O15539	181 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	XRCC3	O43542	346 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	SSX5	O60225	188 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	HPGDS	O60760	199 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	EIF4E	P06730	217 aa	Known RBP	10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	ZNF137P	P52743	207 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	TAS2R20	P59543	309 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	PLGLA	Q15195	96 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	KHDC1L	Q5JSQ8	128 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	LY6G6F	Q5SQ64	297 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	ZNF833P	Q6ZTB9	187 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	GVQW1	Q8N7I0	195 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	BEST4	Q8NFU0	473 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	OR4F17	Q8NGA8	305 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	ACOT12	Q8WYK0	555 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	OR4F4	Q96R69	305 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	CITED2	Q99967	270 aa	Predicted RBP	10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	NABP2	Q9BQ15	211 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	ABCG5	Q9H222	651 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	AUNIP	Q9H7T9	357 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	KIAA1456	Q9P272	454 aa		10.09	□□□□□ -0.79
FDPS-204	ENST00000461507	TRBV6-7	A0A0A0MS04	114 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	APOA2	P02652	100 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	CTXN2	P0C2S0	81 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	ZNF182	P17025	639 aa	Predicted RBP	10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	NFYA	P23511	347 aa	Predicted RBP	10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	CD83	Q01151	205 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	SPCS2	Q15005	226 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	RNASE12	Q5GAN4	147 aa	Known RBP	10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	FAM71F2	Q6NXP2	309 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	REC114	Q7Z4M0	266 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	SLC35E3	Q7Z769	313 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	CENPV	Q7Z7K6	275 aa	Predicted RBP	10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	SNX29P2	Q8IUI4	249 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	C5orf56	Q8N8D9	126 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	RAB2B	Q8WUD1	216 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	ANXA10	Q9UJ72	324 aa		10.08	□□□□□ -0.8
FDPS-204	ENST00000461507	ITGB1BP1	O14713	200 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	FGF16	O43320	207 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	AMY1A	P04745	511 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	AMY2A	P04746	511 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	CBX5	P45973	191 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	LUM	P51884	338 aa	Predicted RBP	10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	ACTB	P60709	375 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	CBX3	Q13185	183 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	NSUN5P1	Q3KNT7	163 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	CNIH2	Q6PI25	160 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	ABHD5	Q8WTS1	349 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	GHITM	Q9H3K2	345 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507	LINC00527	Q9UJ94	153 aa		10.07	□□□□□ -0.8
FDPS-204	ENST00000461507		A0A1W2PRX2	142 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	OR5H14	A6NHG9	310 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	APOA1	P02647	267 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	CT45A6	P0DMU7	189 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	CT45A5	P0DMU8	189 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	CT45A7	P0DMV0	189 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	ELK1	P19419	428 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	CNTFR	P26992	372 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	PRSS3	P35030	304 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	F2RL1	P55085	397 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	RPS16	P62249	146 aa	Known RBP	10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	TCTEX1D4	Q5JR98	221 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507		Q6ZS49	121 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	FOXRED2	Q8IWF2	684 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	H1FOO	Q8IZA3	346 aa	Predicted RBP	10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	WFDC9	Q8NEX5	89 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	OR8H1	Q8NGG4	311 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	R3HDM4	Q96D70	268 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	AGMAT	Q9BSE5	352 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	SLC35D1	Q9NTN3	355 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	NECAP2	Q9NVZ3	263 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	EXTL2	Q9UBQ6	330 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507	WASHC3	Q9Y3C0	194 aa		10.06	□□□□□ -0.8
FDPS-204	ENST00000461507		H0YJW9	148 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	NBR2	O15453	112 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	TUSC2	O75896	110 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	DIRAS3	O95661	229 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	MC5R	P33032	325 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	TMBIM6	P55061	237 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	FXYD4	P59646	89 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	EBI3	Q14213	229 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	HOGA1	Q86XE5	327 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507		Q8N6K4	173 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507		Q8N9W7	124 aa		10.05	□□□□□ -0.8
FDPS-204	ENST00000461507	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.05	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms