RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ACTBP60709 375 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-213ENST00000460211 OR4F17Q8NGA8 305 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 OR13F1Q8NGS4 319 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 S100A16Q96FQ6 103 aaKnown RBP11.83□□□□□ -0.52
ATG4B-213ENST00000460211 OR4F4Q96R69 305 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 WASHC3Q9Y3C0 194 aa11.83□□□□□ -0.52
ATG4B-213ENST00000460211 RBBP9O75884 186 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 TFAP2AP05549 437 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 OR8U9P0C7N5 309 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 TGFBR1P36897 503 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 CD83Q01151 205 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 FAM131AQ6UXB0 335 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 FAM71E2Q8N5Q1 922 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 COMMD1Q8N668 190 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 OR5AN1Q8NGI8 311 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 OR8U1Q8NH10 309 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 NUDCD2Q8WVJ2 157 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 KCTD12Q96CX2 325 aaKnown RBP11.82□□□□□ -0.52
ATG4B-213ENST00000460211 SLC25A38Q96DW6 304 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 RNF5Q99942 180 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 MRPS26Q9BYN8 205 aaKnown RBP11.82□□□□□ -0.52
ATG4B-213ENST00000460211 ELF5Q9UKW6 265 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-213ENST00000460211 GAB2Q9UQC2 676 aa11.82□□□□□ -0.52
ATG4B-213ENST00000460211 TSSC4Q9Y5U2 329 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-213ENST00000460211 M0R1X1 148 aa11.81□□□□□ -0.52
ATG4B-213ENST00000460211 NBR2O15453 112 aa11.81□□□□□ -0.52
ATG4B-213ENST00000460211 APOA2P02652 100 aa11.81□□□□□ -0.52
ATG4B-213ENST00000460211 KHDC1LQ5JSQ8 128 aa11.81□□□□□ -0.52
ATG4B-213ENST00000460211 CNIH2Q6PI25 160 aa11.81□□□□□ -0.52
ATG4B-213ENST00000460211 STPG2Q8N412 459 aa11.81□□□□□ -0.52
ATG4B-213ENST00000460211 SLC25A46Q96AG3 418 aa11.81□□□□□ -0.52
ATG4B-213ENST00000460211 R3HDM4Q96D70 268 aa11.81□□□□□ -0.52
ATG4B-213ENST00000460211 NOL4LQ96MY1 436 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-213ENST00000460211 ZNF107Q9UII5 783 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-213ENST00000460211 H0YJW9 148 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 SMIM18P0DKX4 95 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 VBP1P61758 197 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 NCS1P62166 190 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 CBX3Q13185 183 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 UBE2NLQ5JXB2 153 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 LIN54Q6MZP7 749 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 GLDNQ6ZMI3 551 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-213ENST00000460211 ZNF329Q86UD4 541 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 SAMD12Q8N8I0 201 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 DRAXINQ8NBI3 349 aaPredicted RBP11.8□□□□□ -0.52
ATG4B-213ENST00000460211 NPBQ8NG41 125 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 OR2D2Q9H210 308 aa11.8□□□□□ -0.52
ATG4B-213ENST00000460211 IGKV1D-8A0A087WSZ0 117 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 A0A1W2PRX2 142 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 XRCC3O43542 346 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 OR5H8P0DN80 308 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 PF4V1P10720 104 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 VDAC1P21796 283 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 CBX5P45973 191 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 RORCP51449 518 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 ARPC4P59998 168 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 TAGLNQ01995 201 aaKnown RBP11.79□□□□□ -0.52
ATG4B-213ENST00000460211 PLGLAQ15195 96 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 C5orf64Q2M2E5 130 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 TEX38Q6PEX7 206 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 GPR141Q7Z602 305 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 ANKRD13BQ86YJ7 626 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 PDPNQ86YL7 162 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 H1FOOQ8IZA3 346 aaPredicted RBP11.79□□□□□ -0.52
ATG4B-213ENST00000460211 ACOT12Q8WYK0 555 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 TSNAXQ99598 290 aaKnown RBP11.79□□□□□ -0.52
ATG4B-213ENST00000460211 AUNIPQ9H7T9 357 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 ANXA10Q9UJ72 324 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 LINC00527Q9UJ94 153 aa11.79□□□□□ -0.52
ATG4B-213ENST00000460211 SMIM31A0A1B0GVY4 71 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 LINC01548A6NM66 108 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 SSX5O60225 188 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 PROP1O75360 226 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 SLC22A5O76082 557 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 NDUFA3O95167 84 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 HLA-DRB1P01911 266 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 LUMP51884 338 aaPredicted RBP11.78□□□□□ -0.52
ATG4B-213ENST00000460211 RPS16P62249 146 aaKnown RBP11.78□□□□□ -0.52
ATG4B-213ENST00000460211 TCTEX1D4Q5JR98 221 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 TMEM69Q5SWH9 247 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 ZNF383Q8NA42 475 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 BEST4Q8NFU0 473 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 FLYWCH2Q96CP2 140 aaKnown RBP11.78□□□□□ -0.52
ATG4B-213ENST00000460211 ADTRPQ96IZ2 230 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 RITA1Q96K30 269 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 CMTM3Q96MX0 182 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 HSPB9Q9BQS6 159 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 SLC35D1Q9NTN3 355 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 ZFP57Q9NU63 452 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 SDHAF2Q9NX18 166 aa11.78□□□□□ -0.52
ATG4B-213ENST00000460211 RRHO14718 337 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 GABARAPO95166 117 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 PRB2P02812 416 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-213ENST00000460211 IGF1P05019 195 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 RRASP10301 218 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 NFYAP23511 347 aaPredicted RBP11.77□□□□□ -0.53
ATG4B-213ENST00000460211 CNTFRP26992 372 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 THBS3P49746 956 aa11.77□□□□□ -0.53
ATG4B-213ENST00000460211 CXorf66Q5JRM2 361 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms