RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 MRPL30Q8TCC3 161 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 RDH12Q96NR8 316 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 DERL3Q96Q80 235 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 SULT4A1Q9BR01 284 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 GON7Q9BXV9 100 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 MRPL20Q9BYC9 149 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 ANKRD60Q9BZ19 345 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 OR51J1Q9H342 316 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 GAR1Q9NY12 217 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 RCC2Q9P258 522 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 CKLFQ9UBR5 152 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF107Q9UII5 783 aaPredicted RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 EXOSC1Q9Y3B2 195 aaKnown RBP3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 FBXO7Q9Y3I1 522 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 U3KQK5 164 aa3.64□□□□□ -1.83
GTF3C3-208ENST00000455546 IGHV7-81A0A0B4J1V7 117 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 IRGMA1A4Y4 181 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 PTGES3LE9PB15 166 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 I3L521 148 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 ATP6V0E1O15342 81 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 LANCL1O43813 399 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 IGF1P05019 195 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 CT45A6P0DMU7 189 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 CT45A5P0DMU8 189 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 CT45A7P0DMV0 189 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 HTR2CP28335 458 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 BLVRBP30043 206 aaPredicted RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 SLC6A1P30531 599 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 RAB9AP51151 201 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF137PP52743 207 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 SUMO2P61956 95 aaKnown RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 Q3ZCU0 254 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 ACSM3Q53FZ2 586 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 RPL39P5Q59GN2 51 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 C6orf183Q5T699 404 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 C9orf66Q5T8R8 295 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 TTC23Q5W5X9 447 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 TMEM65Q6PI78 240 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 AHSA2Q719I0 299 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 C6orf201Q7Z4U5 140 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 GAPTQ8N292 157 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 NANOGP1Q8N7R0 232 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 DRAXINQ8NBI3 349 aaPredicted RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 SETD6Q8TBK2 473 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 C4orf3Q8WVX3 66 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 IL1F10Q8WWZ1 152 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 LINC00476Q8WZB0 136 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 DCUN1D4Q92564 292 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 DLX4Q92988 240 aaPredicted RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 GALMQ96C23 342 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 MRPS24Q96EL2 167 aaKnown RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 ABHD14BQ96IU4 210 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 MS4A10Q96PG2 267 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 CLCC1Q96S66 551 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 NABP2Q9BQ15 211 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 ZNF251Q9BRH9 671 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 NICN1Q9BSH3 213 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 HDHD3Q9BSH5 251 aaPredicted RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM103A1Q9BTL3 118 aaKnown RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 ABHD14AQ9BUJ0 271 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 GPR61Q9BZJ8 451 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 PARP12Q9H0J9 701 aaKnown RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 FBXL15Q9H469 300 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 SPACA1Q9HBV2 294 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 PARP11Q9NR21 331 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 KCNIP1Q9NZI2 227 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 NKX1-2Q9UD57 310 aaPredicted RBP3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 PSORS1C1Q9UIG5 152 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 RNF150Q9ULK6 438 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 A3GALT2U3KPV4 340 aa3.63□□□□□ -1.83
GTF3C3-208ENST00000455546 DNAH3Q8TD57 4116 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 IGHV4OR15-8A0A075B7B6 117 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 A0A087WW49 117 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SAA2-SAA4A0A096LPE2 208 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 A0A0A6YYD4 124 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 TRAV41A0A0B4J266 112 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 A0A1W2PN81 502 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 FAM90A10PA6NDY2 464 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 EFCAB10A6NFE3 127 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 ANKRD65E5RJM6 399 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 EBAG9O00559 213 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 NBR2O15453 112 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SOCS1O15524 211 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SOX15O60248 233 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 YPEL1O60688 119 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 PDCD6O75340 191 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 PROP1O75360 226 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SC5DO75845 299 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 IGHV3-11P01762 117 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SCTP09683 121 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 NHLRC4P0CG21 123 aaPredicted RBP3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SAA2P0DJI9 122 aaPredicted RBP3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SPNP16150 400 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 SRMP19623 302 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 CHATP28329 748 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 CHRNA7P36544 502 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 CEACAM6P40199 344 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 WNT4P56705 351 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 CX3CL1P78423 397 aa3.62□□□□□ -1.83
GTF3C3-208ENST00000455546 HTD2P86397 168 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms