RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 TRDV1A0A1B0GX56 115 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR5H14A6NHG9 310 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 RRHO14718 337 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 GSTP1P09211 210 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 CD3GP09693 182 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 SNRPBP14678 240 aaKnown RBP12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 GNB3P16520 340 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 GABARAPL2P60520 117 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 NR2C2APQ86WQ0 139 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR5AN1Q8NGI8 311 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 C4orf3Q8WVX3 66 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 PTX4Q96A99 478 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 RDH8Q9NYR8 311 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 WASHC3Q9Y3C0 194 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 FBXO7Q9Y3I1 522 aa12.83□□□□□ -0.36
NCKIPSD-208ENST00000454134 FCN1O00602 326 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 FCGR3AP08637 254 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 RAB3BP20337 219 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 PSMB9P28065 219 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 MC5RP33032 325 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 RANBP1P43487 201 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 LUMP51884 338 aaPredicted RBP12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 MRPS15P82914 257 aaKnown RBP12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 KIAA0141Q14154 515 aaPredicted RBP12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 PLGLAQ15195 96 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 ECSCRQ19T08 205 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 IGSF11Q5DX21 431 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 TMEM65Q6PI78 240 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 SPARTQ8N0X7 666 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR10R2Q8NGX6 335 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 MYOZ3Q8TDC0 251 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 MAFIPQ8WZ33 124 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR5B12Q96R08 314 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 GHITMQ9H3K2 345 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 GNB4Q9HAV0 340 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 ZNF221Q9UK13 617 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 A3GALT2U3KPV4 340 aa12.82□□□□□ -0.36
NCKIPSD-208ENST00000454134 RAB27BO00194 218 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 MFNGO00587 321 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 BET1O15155 118 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 FABP7O15540 132 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 IGLV1-40P01703 118 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 GSTT2P0CG29 244 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 GSTT2BP0CG30 244 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 CX3CL1P78423 397 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 UBE2UQ5VVX9 321 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 ZNF383Q8NA42 475 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR4A4PQ8NGN8 299 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR5M8Q8NGP6 311 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 CASTOR1Q8WTX7 329 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 CLCC1Q96S66 551 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 CHCHD6Q9BRQ6 235 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 ZNF230Q9UIE0 474 aaPredicted RBP12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 GAB2Q9UQC2 676 aa12.81□□□□□ -0.36
NCKIPSD-208ENST00000454134 A0A1W2PN81 502 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 M0R1X1 148 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 SOX15O60248 233 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 MRPS14O60783 128 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 IGKV1-16P04430 117 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 HIST1H1DP16402 221 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 RAB6AP20340 208 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 GADD45AP24522 165 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 CHRNA7P36544 502 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 ZNF660Q6AZW8 331 aaPredicted RBP12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 ZNF491Q8N8L2 437 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 MINDY2Q8NBR6 621 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR11H1Q8NG94 326 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 ABHD5Q8WTS1 349 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 UBE2E2Q96LR5 201 aa12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 METTL1Q9UBP6 276 aaKnown RBP12.8□□□□□ -0.36
NCKIPSD-208ENST00000454134 RBBP9O75884 186 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 TFAP2AP05549 437 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR8U9P0C7N5 309 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 EGR2P11161 476 aaPredicted RBP12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 GALP22466 123 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 SERPINB10P48595 397 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 RAB9AP51151 201 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 GNB1P62873 340 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 FHL3Q13643 280 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 PSG5Q15238 335 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 C19orf54Q5BKX5 351 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 FAM103A1Q9BTL3 118 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 ATG5Q9H1Y0 275 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 TXNL4BQ9NX01 149 aaKnown RBP12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 ELF5Q9UKW6 265 aaPredicted RBP12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 VSIG4Q9Y279 399 aa12.79□□□□□ -0.36
NCKIPSD-208ENST00000454134 SEC14L6B5MCN3 397 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 I3L521 148 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 RPS16P62249 146 aaKnown RBP12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 DGCR2P98153 550 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 ARFRP1Q13795 201 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 ASPHD1Q5U4P2 390 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR1N2Q8NGR9 330 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR10J5Q8NHC4 309 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 CABLES2Q9BTV7 478 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 ALX4Q9H161 411 aaPredicted RBP12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 OR2D2Q9H210 308 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 Q9H521 79 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 TPSG1Q9NRR2 321 aa12.78□□□□□ -0.36
NCKIPSD-208ENST00000454134 FOXA2Q9Y261 457 aaPredicted RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 365.8 ms