RNA–Protein interactions for RNA: ENST00000447507.1

SNHG3-203, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 185 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-203ENST00000447507 GATCO43716 136 aaKnown RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 SERPINA7P05543 415 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 PTMAP06454 111 aaKnown RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 LGALS1P09382 135 aaKnown RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 TFPTP0C1Z6 253 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 UBBP0CG47 229 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ANXA8P13928 327 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 GADD45AP24522 165 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ZNF93P35789 620 aaPredicted RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 RPL28P46779 137 aaKnown RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 REG1BP48304 166 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 PSMB3P49720 205 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ETV1P50549 477 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 CTBP2P56545 445 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 CLDN8P56748 225 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 DAOAP59103 153 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 TAS2R30P59541 319 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 PSMC5P62195 406 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 RUNX1Q01196 453 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 IL18Q14116 193 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ELOBQ15370 118 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 TRAM1Q15629 374 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 MESTQ5EB52 335 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 CENPWQ5EE01 88 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 C6orf183Q5T699 404 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 FAM162BQ5T6X4 162 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 HENMT1Q5T8I9 393 aaKnown RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 PIP5KL1Q5T9C9 394 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 FAM27BQ5VT28 67 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ANXA8L1Q5VT79 327 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 SPATA31B1PQ5VZV4 182 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 LAMTOR1Q6IAA8 161 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 AMTNQ6UX39 209 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ZNF705AQ6ZN79 300 aaPredicted RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 PLCZ1Q86YW0 608 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 C1orf174Q8IYL3 243 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 UMODL1-AS1Q8N2C9 162 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ARHGAP18Q8N392 663 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 SLC22A24Q8N4F4 322 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 BBOF1Q8ND07 529 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 CCDC112Q8NEF3 446 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 OR4K17Q8NGC6 315 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 OR13C9Q8NGT0 318 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 TSKUQ8WUA8 353 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ASB13Q8WXK3 278 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 AQP3Q92482 292 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 CDKL2Q92772 493 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 SFRP2Q96HF1 295 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 IMMP2LQ96T52 175 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 DOHHQ9BU89 302 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 CLSTN2Q9H4D0 955 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 FBXO44Q9H4M3 255 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 EXO5Q9H790 373 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 IFT46Q9NQC8 304 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 TAAR3PQ9P1P4 343 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 DNAJC12Q9UKB3 198 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 HHLA2Q9UM44 414 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 FIS1Q9Y3D6 152 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 POLR3HQ9Y535 204 aaPredicted RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 SNURFQ9Y675 71 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 TONSLQ96HA7 1378 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 CNTRLQ7Z7A1 2325 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 COL1A1P02452 1464 aaPredicted RBP-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 SMARCA4P51532 1647 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 COL4A5P29400 1685 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 STRCQ7RTU9 1775 aa-0.24□□□□□ -2.45
SNHG3-203ENST00000447507 ALPK3Q96L96 1907 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 TRAV7A0A075B6U4 112 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 SYNJ2BP-COX16A0A087WUM0 186 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 MEIKINA0A087WXM9 373 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 MEIS3P1A6NDR6 274 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 F8W036 122 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 BOLA2-SMG1P6H3BVE0 249 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 H7C2G1 150 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 GPR171O14626 319 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 COCHO43405 550 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 OR2T1O43869 369 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 KLRC4O43908 158 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 ASS1P00966 412 aaKnown RBP-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 CD7P09564 240 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 TRGC1P0CF51 173 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 CD24P25063 80 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 OPRM1P35372 400 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 ACTR1BP42025 376 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 OR1E2P47887 323 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 STC1P52823 247 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 RBM11P57052 281 aaKnown RBP-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 OR10A3P58181 314 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 TRIP13Q15645 432 aaPredicted RBP-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 TBC1D28Q2M2D7 210 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 PLPPR5Q32ZL2 321 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 SAPCD1Q5SSQ6 148 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 HBMQ6B0K9 141 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 FAHD1Q6P587 224 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 LYZL1Q6UWQ5 148 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 RPS19BP1Q86WX3 136 aaKnown RBP-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 COMMD1Q8N668 190 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 OR5B17Q8NGF7 314 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 DOK4Q8TEW6 326 aa-0.25□□□□□ -2.45
SNHG3-203ENST00000447507 ABHD14BQ96IU4 210 aa-0.25□□□□□ -2.45
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms