RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 HIKESHIQ53FT3 197 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 PAN3Q58A45 887 aaKnown RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 ATP1A1-AS1Q5TC04 95 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 KRTAP5-4Q6L8H1 288 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 Q6ZS49 121 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 P4HA3Q7Z4N8 544 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 LINC00596Q86U02 117 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF573Q86YE8 665 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 CALHM1Q8IU99 346 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 BAP18Q8IXM2 172 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 CCDC36Q8IYA8 594 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC38A6Q8IZM9 456 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 EIF4E3Q8N5X7 224 aaKnown RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 CCDC71LQ8N9Z2 235 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SUMF1Q8NBK3 374 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 RELL2Q8NC24 303 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 DEFB124Q8NES8 71 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR56B2PQ8NGI1 322 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5A2Q8NGI9 324 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR1S1Q8NH92 325 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 STOML3Q8TAV4 291 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SUN5Q8TC36 379 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 OR5P3Q8WZ94 311 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 GALNT14Q96FL9 552 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 GMPPAQ96IJ6 420 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF75AQ96N20 296 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 LINC00052Q96N35 136 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 PAPOLGQ9BWT3 736 aaKnown RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SUCNR1Q9BXA5 334 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SHARPINQ9H0F6 387 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 WDR13Q9H1Z4 485 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 RIMS4Q9H426 269 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 NAA60Q9H7X0 242 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZDHHC11Q9H8X9 412 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 NGBQ9NPG2 151 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 C12orf4Q9NQ89 552 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 GLRX2Q9NS18 164 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 FAM212BQ9NTI7 297 aaPredicted RBP2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SLC35D1Q9NTN3 355 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 GSKIPQ9P0R6 139 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 ZNF581Q9P0T4 197 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 SPRR3Q9UBC9 169 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 GLS2Q9UI32 602 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 MPC1Q9Y5U8 109 aa2.84□□□□□ -1.95
HMGB3P11-201ENST00000440127 RP1P56715 2156 aa2.84□□□□□ -1.96
HMGB3P11-201ENST00000440127 ASXL3Q9C0F0 2248 aa2.84□□□□□ -1.96
HMGB3P11-201ENST00000440127 COL27A1Q8IZC6 1860 aaPredicted RBP2.84□□□□□ -1.96
HMGB3P11-201ENST00000440127 TRAV17A0A0B4J275 112 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 KIR2DS1A0A191URI9 304 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPAARA0A1B0GVQ0 90 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 RAB19A4D1S5 217 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZSCAN5BA6NJL1 495 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR5B21A6NL26 309 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 MPTX1A8MV57 137 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 TEX46H3BTG2 121 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 K7EPK0 472 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 CCL24O00175 119 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 LGALS8O00214 317 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZG16O60844 167 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 LRP3O75074 770 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR7C1O76099 320 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 PPYP01298 95 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGHG3P01860 377 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR5AC1P0C628 307 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 SELEP16581 610 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 AADACP22760 399 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 RPL12P30050 165 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 DUTP33316 252 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 TIMP3P35625 211 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 KIR2DS4P43632 304 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 NPBWR2P48146 333 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 TNFSF10P50591 281 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 CNN1P51911 297 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 FXYD4P59646 89 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 S100A10P60903 97 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 UBE2NP61088 152 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 HERV-K104P61576 105 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 GNG3P63215 75 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 SRPXP78539 464 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 TGFBR3Q03167 851 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 IL24Q13007 206 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM187Q14656 261 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 KIR2DS1Q14954 304 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 TBC1D28Q2M2D7 210 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 MPV17LQ2QL34 196 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF876PQ49A33 203 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 FAM74A1Q5RGS3 127 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR2T2Q6IF00 324 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 EIF5AL1Q6IS14 154 aaKnown RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 HAGHLQ6PII5 290 aaPredicted RBP2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 UQCC3Q6UW78 93 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 TFAP2EQ6VUC0 442 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 MDP1Q86V88 176 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 LGI3Q8N145 548 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 FAM58AQ8N1B3 248 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 STPG2Q8N412 459 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 FAM71E2Q8N5Q1 922 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 LRTM2Q8N967 370 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF565Q8N9K5 539 aa2.83□□□□□ -1.96
HMGB3P11-201ENST00000440127 SLC30A7Q8NEW0 376 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms