RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 ECSCRQ19T08 205 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 C2orf76Q3KRA6 126 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 MOGAT2Q3SYC2 334 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 FAM71F2Q6NXP2 309 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 TMEM65Q6PI78 240 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 ZNF383Q8NA42 475 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 CLCC1Q96S66 551 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 ASCL2Q99929 193 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 HSF4Q9ULV5 492 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 A3GALT2U3KPV4 340 aa13.22□□□□□ -0.29
CPSF4-203ENST00000430038 A0A1W2PN81 502 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 ITGB1BP1O14713 200 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 CRHBPP24387 322 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 CHRNA7P36544 502 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 SLURP1P55000 103 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 SSBP2P81877 361 aaPredicted RBP13.21□□□□□ -0.29
CPSF4-203ENST00000430038 ZNF616Q08AN1 781 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 PSG5Q15238 335 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 DLX4Q92988 240 aaPredicted RBP13.21□□□□□ -0.29
CPSF4-203ENST00000430038 PTX4Q96A99 478 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 C5orf30Q96GV9 206 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 PLGRKTQ9HBL7 147 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 ISYNA1Q9NPH2 558 aa13.21□□□□□ -0.29
CPSF4-203ENST00000430038 TMEM272A0A1B0GTI8 110 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 OR5H14A6NHG9 310 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 RGS10O43665 173 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 CALRP27797 417 aaKnown RBP13.2□□□□□ -0.3
CPSF4-203ENST00000430038 MLLT11Q13015 90 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-203ENST00000430038 SSX1Q16384 188 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 ZNF660Q6AZW8 331 aaPredicted RBP13.2□□□□□ -0.3
CPSF4-203ENST00000430038 FAM3DQ96BQ1 224 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 MGLLQ99685 303 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 TOLLIPQ9H0E2 274 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 VCXQ9H320 206 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 KIAA1456Q9P272 454 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 TPRKBQ9Y3C4 175 aa13.2□□□□□ -0.3
CPSF4-203ENST00000430038 IGHV4OR15-8A0A075B7B6 117 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 A0A087WW49 117 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 ARPC1BO15143 372 aaKnown RBP13.19□□□□□ -0.3
CPSF4-203ENST00000430038 ZBTB25P24278 435 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 OR10A3P58181 314 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 RAB11BQ15907 218 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 HES5Q5TA89 166 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 MOB1BQ7L9L4 216 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 WWC2-AS2Q96NR7 200 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 MS4A10Q96PG2 267 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 URM1Q9BTM9 101 aaKnown RBP13.19□□□□□ -0.3
CPSF4-203ENST00000430038 RIMS4Q9H426 269 aaPredicted RBP13.19□□□□□ -0.3
CPSF4-203ENST00000430038 WASHC3Q9Y3C0 194 aa13.19□□□□□ -0.3
CPSF4-203ENST00000430038 A0A0B4J203 849 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 H7C2Y5 167 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 IGHV3-11P01762 117 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 GSTP1P09211 210 aaKnown RBP13.18□□□□□ -0.3
CPSF4-203ENST00000430038 OR8U8P0C7N1 319 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 MC5RP33032 325 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 PJVKQ0ZLH3 352 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 IGSF11Q5DX21 431 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 CD200R1LQ6Q8B3 271 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 PRSS48Q7RTY5 328 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 PPP1R27Q86WC6 154 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 NR2C2APQ86WQ0 139 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 LFNGQ8NES3 379 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 CMSS1Q9BQ75 279 aaKnown RBP13.18□□□□□ -0.3
CPSF4-203ENST00000430038 CCDC90BQ9GZT6 254 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 C12orf4Q9NQ89 552 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 RDH8Q9NYR8 311 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 METTL1Q9UBP6 276 aaKnown RBP13.18□□□□□ -0.3
CPSF4-203ENST00000430038 ELF5Q9UKW6 265 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-203ENST00000430038 FOXA2Q9Y261 457 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-203ENST00000430038 ZNF256Q9Y2P7 627 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-203ENST00000430038 V9GY05 133 aa13.18□□□□□ -0.3
CPSF4-203ENST00000430038 TRDCB7Z8K6 153 aa13.17□□□□□ -0.3
CPSF4-203ENST00000430038 OVOL1O14753 267 aa13.17□□□□□ -0.3
CPSF4-203ENST00000430038 DENRO43583 198 aaKnown RBP13.17□□□□□ -0.3
CPSF4-203ENST00000430038 CA2P00918 260 aa13.17□□□□□ -0.3
CPSF4-203ENST00000430038 IGLV2-23P01705 113 aa13.17□□□□□ -0.3
CPSF4-203ENST00000430038 MRGPRG-AS1Q2M3A8 158 aa13.17□□□□□ -0.3
CPSF4-203ENST00000430038 MAFIPQ8WZ33 124 aa13.17□□□□□ -0.3
CPSF4-203ENST00000430038 ZNF230Q9UIE0 474 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-203ENST00000430038 HSPA12AO43301 675 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 ARL6IP5O75915 188 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 CRYGBP07316 175 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 GSTT2P0CG29 244 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 GSTT2BP0CG30 244 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 PLGLAQ15195 96 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 TRAM1Q15629 374 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 AKIRIN2Q53H80 203 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 UNQ5815/PRO19632Q6UWF5 114 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 ZNF562Q6V9R5 426 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 RHOVQ96L33 236 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 ZMAT5Q9UDW3 170 aaKnown RBP13.16□□□□□ -0.3
CPSF4-203ENST00000430038 U3KQK5 164 aa13.16□□□□□ -0.3
CPSF4-203ENST00000430038 IGKV1D-8A0A087WSZ0 117 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 SRRM4A7MD48 611 aaKnown RBP13.15□□□□□ -0.3
CPSF4-203ENST00000430038 LINC01619G3V211 115 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 RAB27BO00194 218 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 SLC25A17O43808 307 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 RBBP9O75884 186 aa13.15□□□□□ -0.3
CPSF4-203ENST00000430038 LGALS1P09382 135 aaKnown RBP13.15□□□□□ -0.3
CPSF4-203ENST00000430038 NHLRC4P0CG21 123 aaPredicted RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms