RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 BSXQ3C1V8 233 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 CYB5R2Q6BCY4 276 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 OR10J5Q8NHC4 309 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 LURAP1Q96LR2 239 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 C1QTNF5Q9BXJ0 243 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 NAT8Q9UHE5 227 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 PTPRQQ9UMZ3 2332 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 C5orf49A4QMS7 147 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 CD300LBA8K4G0 201 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 NEURL1O76050 574 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 CASP6P55212 293 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 MEF2BQ02080 365 aaPredicted RBP12.12□□□□□ -0.47
MSH5-206ENST00000423982 PMS2P11Q13670 270 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 TMEM241Q24JQ0 296 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 ACSM6Q6P461 480 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 LRP11Q86VZ4 500 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 Q8NFD4 153 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 OR10V1Q8NGI7 309 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 SGCZQ96LD1 299 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 SF3B5Q9BWJ5 86 aaKnown RBP12.12□□□□□ -0.47
MSH5-206ENST00000423982 WDR61Q9GZS3 305 aaKnown RBP12.12□□□□□ -0.47
MSH5-206ENST00000423982 SLC39A9Q9NUM3 307 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 GTF3C1Q12789 2109 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 USF3Q68DE3 2245 aa12.12□□□□□ -0.47
MSH5-206ENST00000423982 TRAV24A0A0B4J272 114 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 IGHV3-64DA0A0J9YX35 117 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 TRAPPC2LH3BP13 241 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 CBR3O75828 277 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 IDH3GP51553 393 aaPredicted RBP12.11□□□□□ -0.47
MSH5-206ENST00000423982 TMEM41BQ5BJD5 291 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.11□□□□□ -0.47
MSH5-206ENST00000423982 SPSB4Q96A44 273 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 PARLQ9H300 379 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 DNAJC13O75165 2243 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 CACNA1DQ01668 2161 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 SPTA1P02549 2419 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 H7BYZ3 331 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 EGR1P18146 543 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 ARG2P78540 354 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 ZNF585BQ52M93 769 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 FAM53AQ6NSI3 398 aaPredicted RBP12.11□□□□□ -0.47
MSH5-206ENST00000423982 IGF2-ASQ6U949 168 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 CYP2G1PQ6ZSU1 146 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 IL22RA2Q969J5 263 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 P2RX4Q99571 388 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 NDUFAF3Q9BU61 184 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 CTDSP1Q9GZU7 261 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 SH2D2AQ9NP31 389 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 KCNS2Q9ULS6 477 aa12.11□□□□□ -0.47
MSH5-206ENST00000423982 FAM166BA8MTA8 275 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 PPP5D1E7EU14 171 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 TCAPO15273 167 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 WDR1O75083 606 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 G0S2P27469 103 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 FAM3BP58499 235 aaPredicted RBP12.1□□□□□ -0.47
MSH5-206ENST00000423982 OR4F5Q8NH21 305 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 RNASEH2CQ8TDP1 164 aaKnown RBP12.1□□□□□ -0.47
MSH5-206ENST00000423982 TAF15Q92804 592 aaKnown RBP eCLIP12.1□□□□□ -0.47
MSH5-206ENST00000423982 ADGRG7Q96K78 797 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 OR4F4Q96R69 305 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 REPIN1Q9BWE0 567 aaKnown RBP12.1□□□□□ -0.47
MSH5-206ENST00000423982 ZNF391Q9UJN7 358 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 RHBDL1O75783 438 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 PMP22Q01453 160 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 RAB24Q969Q5 203 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 PYGO2Q9BRQ0 406 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 PSMG3Q9BT73 122 aaPredicted RBP12.1□□□□□ -0.47
MSH5-206ENST00000423982 ACTR3CQ9C0K3 210 aaPredicted RBP12.1□□□□□ -0.47
MSH5-206ENST00000423982 ABI3Q9P2A4 366 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 RBM7Q9Y580 266 aaKnown RBP12.1□□□□□ -0.47
MSH5-206ENST00000423982 TGOLN2O43493 480 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 SOX15O60248 233 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 KBTBD11O94819 623 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 ARF1P84077 181 aaKnown RBP12.1□□□□□ -0.47
MSH5-206ENST00000423982 SLC38A11Q08AI6 406 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 MRPL21Q7Z2W9 205 aaKnown RBP12.1□□□□□ -0.47
MSH5-206ENST00000423982 MKXQ8IYA7 352 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 OR5P3Q8WZ94 311 aa12.1□□□□□ -0.47
MSH5-206ENST00000423982 RELNP78509 3460 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 C1QTNF9BB2RNN3 333 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 CELA3AP09093 270 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 GDF1P27539 372 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 CHRNA7P36544 502 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 PCBD1P61457 104 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 SRYQ05066 204 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 CEACAM21Q3KPI0 293 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 TEX38Q6PEX7 206 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 CBLN4Q9NTU7 201 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 TP53TG5Q9Y2B4 290 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A10PA6NDY2 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A18PA6NE21 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A16PA6NEW6 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A20PA6NIJ5 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A8PA6NJQ4 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A7PA6NKC0 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 ZNF891A8MT65 544 aaPredicted RBP12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A22PA8MWA6 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A12PA8MX19 464 aa12.09□□□□□ -0.47
MSH5-206ENST00000423982 FAM90A5PA8MXJ8 464 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms