RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 A0A087WW49 117 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 H0YJW9 148 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 SLC22A1O15245 554 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 HSPA12AO43301 675 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 SOX15O60248 233 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 RBBP9O75884 186 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 OR8U9P0C7N5 309 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 GP9P14770 177 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 CD40LGP29965 261 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 MC5RP33032 325 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 CX3CL1P78423 397 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 UNC119Q13432 240 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 P2RY14Q15391 338 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 ACTBL2Q562R1 376 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 C19orf54Q5BKX5 351 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 OVCH2Q7RTZ1 564 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 MUC7Q8TAX7 377 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 EDARADDQ8WWZ3 215 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 ARPC1AQ92747 370 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 PLEKHJ1Q9NW61 149 aa12.49□□□□□ -0.41
COL18A1-205ENST00000423214 NAPSAO96009 420 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 IGHV3-11P01762 117 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 CD37P11049 281 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 CALRP27797 417 aaKnown RBP12.48□□□□□ -0.41
COL18A1-205ENST00000423214 TPPP2P59282 170 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 QRFPP83859 136 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 TRAM1Q15629 374 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 UNQ5815/PRO19632Q6UWF5 114 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 PPP1R27Q86WC6 154 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 SBSPONQ8IVN8 264 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 FLYWCH2Q96CP2 140 aaKnown RBP12.48□□□□□ -0.41
COL18A1-205ENST00000423214 ABHD14BQ96IU4 210 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 OR4C12Q96R67 309 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 CLCC1Q96S66 551 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 FAM103A1Q9BTL3 118 aaKnown RBP12.48□□□□□ -0.41
COL18A1-205ENST00000423214 TM2D1Q9BX74 207 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 ZMAT4Q9H898 229 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 PLGRKTQ9HBL7 147 aa12.48□□□□□ -0.41
COL18A1-205ENST00000423214 METTL1Q9UBP6 276 aaKnown RBP12.48□□□□□ -0.41
COL18A1-205ENST00000423214 A0A0A6YYD4 124 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 TMEM14DPA8MWL7 114 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 FRMD6-AS1P0C7T7 363 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 CT45A6P0DMU7 189 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 CT45A5P0DMU8 189 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 CT45A7P0DMV0 189 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 CLDN12P56749 244 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 HLA-DRB3P79483 266 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 SRSF7Q16629 238 aaKnown RBP eCLIP12.47□□□□□ -0.41
COL18A1-205ENST00000423214 ACSM6Q6P461 480 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 ZNF880Q6PDB4 577 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 CD200R1LQ6Q8B3 271 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 OR6M1Q8NGM8 313 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 PARP12Q9H0J9 701 aaKnown RBP12.47□□□□□ -0.41
COL18A1-205ENST00000423214 ACOT13Q9NPJ3 140 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 BLOC1S6Q9UL45 172 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 MGAT4AQ9UM21 535 aa12.47□□□□□ -0.41
COL18A1-205ENST00000423214 SLC17A2O00624 439 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 SOCS1O15524 211 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 ARL6IP5O75915 188 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 BPNT1O95861 308 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 CA2P00918 260 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 APOA2P02652 100 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 ARSBP15848 533 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 ZBTB25P24278 435 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 PSMA1P25786 263 aaKnown RBP12.46□□□□□ -0.41
COL18A1-205ENST00000423214 TBCEQ15813 527 aaPredicted RBP12.46□□□□□ -0.41
COL18A1-205ENST00000423214 SSX1Q16384 188 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 MS4A10Q96PG2 267 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 TSNAXQ99598 290 aaKnown RBP12.46□□□□□ -0.41
COL18A1-205ENST00000423214 URM1Q9BTM9 101 aaKnown RBP12.46□□□□□ -0.41
COL18A1-205ENST00000423214 RSRP1Q9BUV0 290 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 LPAR5Q9H1C0 372 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 RIMS4Q9H426 269 aaPredicted RBP12.46□□□□□ -0.41
COL18A1-205ENST00000423214 SLA2Q9H6Q3 261 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 PALMDQ9NP74 551 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 OR1A1Q9P1Q5 309 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 AK3Q9UIJ7 227 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 GAB2Q9UQC2 676 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 NUBP2Q9Y5Y2 271 aa12.46□□□□□ -0.41
COL18A1-205ENST00000423214 FCN1O00602 326 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 ITGB1BP1O14713 200 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 ARPC1BO15143 372 aaKnown RBP12.45□□□□□ -0.42
COL18A1-205ENST00000423214 SPDEFO95238 335 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 TRGV3P03979 118 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 HSPB1P04792 205 aaKnown RBP12.45□□□□□ -0.42
COL18A1-205ENST00000423214 TFAP2AP05549 437 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 RAB11BQ15907 218 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 AKIRIN2Q53H80 203 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 CASC10Q5T4H9 136 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 ZNF367Q7RTV3 350 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 LFNGQ8NES3 379 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 OR5AN1Q8NGI8 311 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 GRPEL2Q8TAA5 225 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 RNF5Q99942 180 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 HDHD3Q9BSH5 251 aaPredicted RBP12.45□□□□□ -0.42
COL18A1-205ENST00000423214 ELOVL1Q9BW60 279 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 C12orf4Q9NQ89 552 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 ZNF355PQ9NSJ1 428 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 ZNF221Q9UK13 617 aa12.45□□□□□ -0.42
COL18A1-205ENST00000423214 STUB1Q9UNE7 303 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms