RNA–Protein interactions for RNA: ENST00000422489.1

NUP50-206, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-206ENST00000422489 PPIFP30405 207 aaKnown RBP7.25□□□□□ -1.25
NUP50-206ENST00000422489 RAB9AP51151 201 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 LUMP51884 338 aaPredicted RBP7.25□□□□□ -1.25
NUP50-206ENST00000422489 OR10A3P58181 314 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 LINC00205P59089 165 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 RPS16P62249 146 aaKnown RBP7.25□□□□□ -1.25
NUP50-206ENST00000422489 CX3CL1P78423 397 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 CD69Q07108 199 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 EGFEM1PQ0D2K5 195 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 SSX1Q16384 188 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 ECSCRQ19T08 205 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 PLAC9Q5JTB6 97 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 FAM71F2Q6NXP2 309 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 ZNF491Q8N8L2 437 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 RNF152Q8N8N0 203 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 CASTOR1Q8WTX7 329 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 RAB3CQ96E17 227 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 RDH8Q9NYR8 311 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 METTL1Q9UBP6 276 aaKnown RBP7.25□□□□□ -1.25
NUP50-206ENST00000422489 VSIG4Q9Y279 399 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 WASHC3Q9Y3C0 194 aa7.25□□□□□ -1.25
NUP50-206ENST00000422489 TRAV1-2A0A0B4J238 106 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 IGKV1-6A0A0C4DH72 117 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 A0A1W2PN81 502 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 SMIM30A4D0T7 59 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 OR5H14A6NHG9 310 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 H0YJW9 148 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 M0R1X1 148 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 ITGB1BP1O14713 200 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 NDUFA3O95167 84 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 TFAP2AP05549 437 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 OR8U9P0C7N5 309 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 GSTT2P0CG29 244 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 GSTT2BP0CG30 244 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 GNB3P16520 340 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 RAB3BP20337 219 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 GADD45AP24522 165 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 CHRNA7P36544 502 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 TALDO1P37837 337 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 ECI1P42126 302 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 TMEM267Q0VDI3 215 aaPredicted RBP7.24□□□□□ -1.25
NUP50-206ENST00000422489 ARFRP1Q13795 201 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 PSG5Q15238 335 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 MOGAT2Q3SYC2 334 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 ZNF260Q3ZCT1 412 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 C9orf66Q5T8R8 295 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 ZNF660Q6AZW8 331 aaPredicted RBP7.24□□□□□ -1.25
NUP50-206ENST00000422489 C22orf42Q6IC83 251 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 PPP1R27Q86WC6 154 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 OR5AN1Q8NGI8 311 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 OR4A4PQ8NGN8 299 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 OR10R2Q8NGX6 335 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 C4orf3Q8WVX3 66 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 MAFIPQ8WZ33 124 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 UBE2E2Q96LR5 201 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 MS4A10Q96PG2 267 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 AGMATQ9BSE5 352 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 FAM103A1Q9BTL3 118 aaKnown RBP7.24□□□□□ -1.25
NUP50-206ENST00000422489 ATG5Q9H1Y0 275 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 GNB4Q9HAV0 340 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 ZNF230Q9UIE0 474 aaPredicted RBP7.24□□□□□ -1.25
NUP50-206ENST00000422489 ZNF580Q9UK33 172 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 RAB26Q9ULW5 256 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 RBM7Q9Y580 266 aaKnown RBP7.24□□□□□ -1.25
NUP50-206ENST00000422489 PLXNB1O43157 2135 aa7.24□□□□□ -1.25
NUP50-206ENST00000422489 A0A0B4J203 849 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 TRDV1A0A1B0GX56 115 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 SHISA3A0PJX4 238 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 METTL21EPA6NDL7 271 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 IFITM5A6NNB3 132 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 J3QRK9 145 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 LDLRAD4O15165 306 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 FABP7O15540 132 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 RAMP3O60896 148 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 PROP1O75360 226 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 RBBP9O75884 186 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 LY86O95711 162 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 IGLV1-40P01703 118 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 APOA2P02652 100 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 SNRPBP14678 240 aaKnown RBP7.23□□□□□ -1.25
NUP50-206ENST00000422489 PSMB9P28065 219 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 CD40LGP29965 261 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 GNB1P62873 340 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 KIAA0141Q14154 515 aaPredicted RBP7.23□□□□□ -1.25
NUP50-206ENST00000422489 TBCEQ15813 527 aaPredicted RBP7.23□□□□□ -1.25
NUP50-206ENST00000422489 IGSF11Q5DX21 431 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 UNQ5815/PRO19632Q6UWF5 114 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 MINDY2Q8NBR6 621 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 LFNGQ8NES3 379 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 OR10J5Q8NHC4 309 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 PTX4Q96A99 478 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 FLYWCH2Q96CP2 140 aaKnown RBP7.23□□□□□ -1.25
NUP50-206ENST00000422489 PRR25Q96S07 402 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 TSNAXQ99598 290 aaKnown RBP7.23□□□□□ -1.25
NUP50-206ENST00000422489 RNF5Q99942 180 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 GINS4Q9BRT9 223 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 ALX4Q9H161 411 aaPredicted RBP7.23□□□□□ -1.25
NUP50-206ENST00000422489 ZNF355PQ9NSJ1 428 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 GAB2Q9UQC2 676 aa7.23□□□□□ -1.25
NUP50-206ENST00000422489 FBXO7Q9Y3I1 522 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms