RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 HES3Q5TGS1 186 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 PCSK4Q6UW60 755 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 C6orf15Q6UXA7 325 aaPredicted RBP7.56□□□□□ -1.2
SIK3-202ENST00000413553 C20orf204Q6ZNR8 217 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 CENPVQ7Z7K6 275 aaPredicted RBP7.56□□□□□ -1.2
SIK3-202ENST00000413553 UBALD1Q8TB05 177 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 PSMF1Q92530 271 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 TECTBQ96PL2 329 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 OR2H1Q9GZK4 316 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 MANBALQ9NQG1 85 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A10PA6NDY2 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A18PA6NE21 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A16PA6NEW6 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A20PA6NIJ5 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A8PA6NJQ4 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A7PA6NKC0 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A22PA8MWA6 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A12PA8MX19 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A5PA8MXJ8 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A23PA8MXZ1 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 C3orf80F5H4A9 247 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 LILRA1O75019 489 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 CRYAAP02489 173 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A15PP0C7V4 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A13PP0C7W8 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A14PP0C7W9 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FAM90A24PP0C7X0 464 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 OTX2P32243 289 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 PCP4P48539 62 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 PRDX4Q13162 271 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 FFAR4Q5NUL3 377 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 TCF23Q7RTU1 214 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 AAED1Q7RTV5 226 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 ZNF573Q86YE8 665 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 OR2Y1Q8NGV0 311 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 CMTM2Q8TAZ6 248 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 ZCCHC14Q8WYQ9 949 aaKnown RBP7.56□□□□□ -1.2
SIK3-202ENST00000413553 ZPBPQ9BS86 351 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 PATZ1Q9HBE1 687 aaKnown RBP7.56□□□□□ -1.2
SIK3-202ENST00000413553 OR1A1Q9P1Q5 309 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 PAM16Q9Y3D7 125 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 ESPL1Q14674 2120 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 ASPMQ8IZT6 3477 aa7.56□□□□□ -1.2
SIK3-202ENST00000413553 TRAV39A0A0B4J263 110 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 C11orf94C9JXX5 98 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 WDR1O75083 606 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 IGHV3-9P01782 118 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 CCL3P10147 92 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 UBE2G2P60604 165 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 ZNF324BQ6AW86 544 aaPredicted RBP7.55□□□□□ -1.2
SIK3-202ENST00000413553 MKXQ8IYA7 352 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 DEFB124Q8NES8 71 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 LSM10Q969L4 123 aaKnown RBP7.55□□□□□ -1.2
SIK3-202ENST00000413553 ZNF488Q96MN9 340 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 MTCH1Q9NZJ7 389 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 KLF7O75840 302 aaPredicted RBP7.55□□□□□ -1.2
SIK3-202ENST00000413553 NTF4P34130 210 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 LCN2P80188 198 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 SRSF7Q16629 238 aaKnown RBP eCLIP7.55□□□□□ -1.2
SIK3-202ENST00000413553 ARSJQ5FYB0 599 aaPredicted RBP7.55□□□□□ -1.2
SIK3-202ENST00000413553 WDYHV1Q96HA8 205 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 PGPEP1LA6NFU8 196 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 SYNGR1O43759 233 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 VENTXO95231 258 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 CCL2P13500 99 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 LIFP15018 202 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 ADMP35318 185 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 DSCR4P56555 118 aaPredicted RBP7.55□□□□□ -1.2
SIK3-202ENST00000413553 CPT1CQ8TCG5 803 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 DIRC2Q96SL1 478 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 CRIM1Q9NZV1 1036 aa7.55□□□□□ -1.2
SIK3-202ENST00000413553 DMXL1Q9Y485 3027 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 TNFSF15O95150 251 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 COX5AP20674 150 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 HNF1AP20823 631 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 TNFSF10P50591 281 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 RPL15P61313 204 aaKnown RBP7.54□□□□□ -1.2
SIK3-202ENST00000413553 PCBD1P61457 104 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 TCF15Q12870 199 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 OR5I1Q13606 314 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 TDRG1Q3Y452 100 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 C9orf135Q5VTT2 229 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 MRPL21Q7Z2W9 205 aaKnown RBP7.54□□□□□ -1.2
SIK3-202ENST00000413553 ZNF709Q8N972 641 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 OPN3Q9H1Y3 402 aaPredicted RBP7.54□□□□□ -1.2
SIK3-202ENST00000413553 ZDHHC11Q9H8X9 412 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 LPAR2Q9HBW0 351 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 RYDENQ9NUL5 291 aaKnown RBP7.54□□□□□ -1.2
SIK3-202ENST00000413553 LIN7CQ9NUP9 197 aaKnown RBP7.54□□□□□ -1.2
SIK3-202ENST00000413553 TIMM9Q9Y5J7 89 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 PXMP4Q9Y6I8 212 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 FAM186AA6NE01 2351 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 ZIC3O60481 467 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 UMODP07911 640 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 C1QTNF9P0C862 333 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 TFF3Q07654 80 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 TMEM183BQ1AE95 376 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 LINC01551Q86U37 167 aa7.54□□□□□ -1.2
SIK3-202ENST00000413553 SGMS2Q8NHU3 365 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms